RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 FAM26FQ5R3K3 315 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 TTBK2Q6IQ55 1244 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 HDXQ7Z353 690 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 ERMNQ8TAM6 284 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 AMNQ9BXJ7 453 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 ANO3Q9BYT9 981 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 PANK4Q9NVE7 773 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 PUF60Q9UHX1 559 aaKnown RBP14.31□□□□□ -0.12
SHMT2-205ENST00000553474 FAM184BQ9ULE4 1060 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 COL4A3BPQ9Y5P4 624 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 ATRNL1Q5VV63 1379 aa14.31□□□□□ -0.12
SHMT2-205ENST00000553474 SSU72P8A0A1W2PR75 194 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 TARSL2A2RTX5 802 aaKnown RBP14.3□□□□□ -0.12
SHMT2-205ENST00000553474 ENTPD3O75355 529 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 EIF3JO75822 258 aaKnown RBP14.3□□□□□ -0.12
SHMT2-205ENST00000553474 PRLRP16471 622 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 ITIH3Q06033 890 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 NFIAQ12857 509 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 Q4G0T1 1027 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 SLFN13Q68D06 897 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 KCTD1Q719H9 257 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 CRYGNQ8WXF5 182 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 RUBCNQ92622 972 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 FAM20AQ96MK3 541 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 MXD3Q9BW11 206 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 DNAJC18Q9H819 358 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 ZNF541Q9H0D2 1346 aa14.3□□□□□ -0.12
SHMT2-205ENST00000553474 FRMD3A2A2Y4 597 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ABL1P00519 1130 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 EEF2P13639 858 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 MMP14P50281 582 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ATP2B2Q01814 1243 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 CDC37Q16543 378 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 EDRF1Q3B7T1 1238 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 DACT2Q5SW24 774 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 BEND6Q5SZJ8 279 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ZNF771Q7L3S4 317 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 CLEC10AQ8IUN9 316 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ZC3H3Q8IXZ2 948 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 SECISBP2LQ93073 1101 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 NUDT12Q9BQG2 462 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 LUC7LQ9NQ29 371 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 JRKLQ9Y4A0 524 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 SEC31AO94979 1220 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 SLC16A2P36021 539 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ICA1Q05084 483 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 MAPK8IP2Q13387 824 aaPredicted RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 SMC1AQ14683 1233 aaKnown RBP14.29□□□□□ -0.12
SHMT2-205ENST00000553474 MAP9Q49MG5 647 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 TAF3Q5VWG9 929 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 KCNK18Q7Z418 384 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 NEK11Q8NG66 645 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 ACBD3Q9H3P7 528 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 CEP72Q9P209 647 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 GJA3Q9Y6H8 435 aa14.29□□□□□ -0.12
SHMT2-205ENST00000553474 MEIS2O14770 477 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 PJA2O43164 708 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 TACC1O75410 805 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 SASH3O75995 380 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 PLA2G4BP0C869 781 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 CIITAP33076 1130 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 BTNL9Q6UXG8 535 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 CCDC155Q8N6L0 562 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 HPS3Q969F9 1004 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 IFIH1Q9BYX4 1025 aaKnown RBP14.28□□□□□ -0.12
SHMT2-205ENST00000553474 ZSWIM4Q9H7M6 989 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 FAM198AQ9UFP1 575 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 L1RE1Q9UN81 338 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 PCDHA2Q9Y5H9 948 aa14.28□□□□□ -0.12
SHMT2-205ENST00000553474 RPA1P27694 616 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 SREBF1P36956 1147 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 KLK7P49862 253 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 KIF11P52732 1056 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 ARHGAP4P98171 946 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 CXCL9Q07325 125 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 ECM1Q16610 540 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 CIAPIN1Q6FI81 312 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 ZNF572Q7Z3I7 529 aaPredicted RBP14.27□□□□□ -0.12
SHMT2-205ENST00000553474 FBXO11Q86XK2 927 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 RNF10Q8N5U6 811 aaKnown RBP14.27□□□□□ -0.12
SHMT2-205ENST00000553474 ALS2CR12Q96Q35 445 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 EPC1Q9H2F5 836 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 DEF6Q9H4E7 631 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 MMRN2Q9H8L6 949 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 ARHGAP20Q9P2F6 1191 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 KIAA1024Q9UPX6 916 aa14.27□□□□□ -0.12
SHMT2-205ENST00000553474 SPDYE3A6NKU9 549 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 F5H6K3 240 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 RBAK-RBAKDNI3L0D1 243 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 FZD9O00144 591 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 PIK3CDO00329 1044 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 TRAF5O00463 557 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 CYP11B2P19099 503 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 KLRC3Q07444 240 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 ABCB5Q2M3G0 1257 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 CCDC70Q6NSX1 233 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 CACNA2D4Q7Z3S7 1137 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 TRIM59Q8IWR1 403 aa14.27□□□□□ -0.13
SHMT2-205ENST00000553474 ETNPPLQ8TBG4 499 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms