RNA–Protein interactions for RNA: ENST00000553287.5

ATXN3-217, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-217ENST00000553287 TRIM48Q8IWZ4 208 aa7.18□□□□□ -1.26
ATXN3-217ENST00000553287 ZDHHC14Q8IZN3 488 aa7.18□□□□□ -1.26
ATXN3-217ENST00000553287 PHOSPHO1Q8TCT1 267 aa7.18□□□□□ -1.26
ATXN3-217ENST00000553287 EXOC2Q96KP1 924 aa7.18□□□□□ -1.26
ATXN3-217ENST00000553287 XYLT2Q9H1B5 865 aa7.18□□□□□ -1.26
ATXN3-217ENST00000553287 LAMC3Q9Y6N6 1575 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 OTOL1A6NHN0 477 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-217ENST00000553287 FAM47E-STBD1D6RA91 191 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 AQP7O14520 342 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 SLC27A2O14975 620 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 GNAT1P11488 350 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 CYP4F22Q6NT55 531 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 LILRA6Q6PI73 481 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 MAMDC2Q7Z304 686 aaPredicted RBP7.17□□□□□ -1.26
ATXN3-217ENST00000553287 NPM2Q86SE8 214 aaKnown RBP7.17□□□□□ -1.26
ATXN3-217ENST00000553287 RBM12BQ8IXT5 1001 aaKnown RBP7.17□□□□□ -1.26
ATXN3-217ENST00000553287 SP8Q8IXZ3 490 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 KYQ8NBH2 561 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 CLEC4DQ8WXI8 215 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 C20orf173Q96LM9 149 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 ALG1Q9BT22 464 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 ASH2LQ9UBL3 628 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 RAPGEFL1Q9UHV5 662 aa7.17□□□□□ -1.26
ATXN3-217ENST00000553287 LRG1P02750 347 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 C6orf222P0C671 652 aaPredicted RBP7.16□□□□□ -1.26
ATXN3-217ENST00000553287 SARSP49591 514 aaKnown RBP7.16□□□□□ -1.26
ATXN3-217ENST00000553287 ZC3H12BQ5HYM0 836 aaKnown RBP7.16□□□□□ -1.26
ATXN3-217ENST00000553287 CARFQ8N187 725 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 TTLL6Q8N841 843 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 DRC1Q96MC2 740 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 SPATA25Q9BR10 227 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 DTLQ9NZJ0 730 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 MRPS23Q9Y3D9 190 aaKnown RBP7.16□□□□□ -1.26
ATXN3-217ENST00000553287 PCDHA8Q9Y5H6 950 aa7.16□□□□□ -1.26
ATXN3-217ENST00000553287 NKRFO15226 690 aaKnown RBP eCLIP7.15□□□□□ -1.26
ATXN3-217ENST00000553287 ITGA1P56199 1179 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 CTSWP56202 376 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 GABREP78334 506 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 GUCY1A3Q02108 690 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 GRIN1Q05586 938 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 PAK1Q13153 545 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 TEPPQ6URK8 271 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 KISS1RQ969F8 398 aaPredicted RBP7.15□□□□□ -1.26
ATXN3-217ENST00000553287 OSBPL2Q9H1P3 480 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 NTMQ9P121 344 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 NUB1Q9Y5A7 615 aa7.15□□□□□ -1.26
ATXN3-217ENST00000553287 THBS2P35442 1172 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 TUSC3Q13454 348 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 LCE4AQ5TA78 99 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 MTDHQ86UE4 582 aaKnown RBP7.14□□□□□ -1.27
ATXN3-217ENST00000553287 LILRB2Q8N423 598 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 DSEQ9UL01 958 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 PCDHA9Q9Y5H5 950 aa7.14□□□□□ -1.27
ATXN3-217ENST00000553287 RIMBP3CA6NJZ7 1639 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 RIMBP3BA6NNM3 1639 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 RIMBP3Q9UFD9 1639 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 PDS5BQ9NTI5 1447 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 LTFP02788 710 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 RPL13P26373 211 aaKnown RBP7.13□□□□□ -1.27
ATXN3-217ENST00000553287 HABP4Q5JVS0 413 aaKnown RBP7.13□□□□□ -1.27
ATXN3-217ENST00000553287 PCDH19Q8TAB3 1148 aa7.13□□□□□ -1.27
ATXN3-217ENST00000553287 UHMK1Q8TAS1 419 aaKnown RBP7.13□□□□□ -1.27
ATXN3-217ENST00000553287 THAP3Q8WTV1 239 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-217ENST00000553287 CDK11AQ9UQ88 783 aaPredicted RBP7.13□□□□□ -1.27
ATXN3-217ENST00000553287 MRC2Q9UBG0 1479 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 A0A0G2JLL6 359 aaPredicted RBP7.12□□□□□ -1.27
ATXN3-217ENST00000553287 SRGAP2CP0DJJ0 459 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 NAT1P18440 290 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 NFE2L2Q16236 605 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 NT5DC1Q5TFE4 455 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 JMYQ8N9B5 988 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 FBXW5Q969U6 566 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 CATSPERZQ9NTU4 200 aa7.12□□□□□ -1.27
ATXN3-217ENST00000553287 CCDC163A0A0D9SF12 145 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 DDX3XO00571 662 aaKnown RBP eCLIP7.11□□□□□ -1.27
ATXN3-217ENST00000553287 CRTAMO95727 393 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 ADAM9Q13443 819 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 BMS1Q14692 1282 aaKnown RBP7.11□□□□□ -1.27
ATXN3-217ENST00000553287 TMC5Q6UXY8 1006 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.11□□□□□ -1.27
ATXN3-217ENST00000553287 OSTM1Q86WC4 334 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 TTLL11Q8NHH1 800 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 RELTQ969Z4 430 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 CLIC6Q96NY7 704 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 ZSWIM4Q9H7M6 989 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 USP40Q9NVE5 1235 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 HSPBP1Q9NZL4 362 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 RBPJLQ9UBG7 517 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 NDOR1Q9UHB4 597 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 WASF3Q9UPY6 502 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 TELO2Q9Y4R8 837 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 MROH2BQ7Z745 1585 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 WDR62O43379 1518 aa7.11□□□□□ -1.27
ATXN3-217ENST00000553287 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.1□□□□□ -1.27
ATXN3-217ENST00000553287 TCRBV5S4A2TA0A5A2 114 aa7.1□□□□□ -1.27
ATXN3-217ENST00000553287 ARVCFO00192 962 aa7.1□□□□□ -1.27
ATXN3-217ENST00000553287 WNT9AO14904 365 aa7.1□□□□□ -1.27
ATXN3-217ENST00000553287 NOBOXO60393 691 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms