RNA–Protein interactions for RNA: ENST00000553011.5

PTCH1-226, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-226ENST00000553011 A0A0U1RQG5 324 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 CCDC194A0A1B0GVG4 234 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 FAM205CA6NFA0 338 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 MAFGO15525 162 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 CIITAP33076 1130 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 NONOQ15233 471 aaKnown RBP eCLIP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 DGKDQ16760 1214 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 INF2Q27J81 1249 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 EARS2Q5JPH6 523 aaKnown RBP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 C1orf53Q5VUE5 145 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 NIPA1Q7RTP0 329 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 FAM184AQ8NB25 1140 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 TNFRSF25Q93038 417 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 MTG1Q9BT17 334 aaPredicted RBP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 AGO4Q9HCK5 861 aaKnown RBP16.06■□□□□ 0.16
PTCH1-226ENST00000553011 BRMS1Q9HCU9 246 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 PCDH10Q9P2E7 1040 aa16.06■□□□□ 0.16
PTCH1-226ENST00000553011 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 ARVCFO00192 962 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 KPNA6O60684 536 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 PQBP1O60828 265 aaKnown RBP16.05■□□□□ 0.16
PTCH1-226ENST00000553011 ZNF286BP0CG31 522 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 HOXD8P13378 290 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-226ENST00000553011 USP11P51784 963 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 TLE2Q04725 743 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 ITGB3BPQ13352 177 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-226ENST00000553011 ITGA7Q13683 1181 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 PRR16Q569H4 304 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 PIK3AP1Q6ZUJ8 805 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 DIS3L2Q8IYB7 885 aaKnown RBP16.05■□□□□ 0.16
PTCH1-226ENST00000553011 KAT2BQ92831 832 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 LENG9Q96B70 501 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 GPR20Q99678 358 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 ZMYND8Q9ULU4 1186 aaPredicted RBP16.05■□□□□ 0.16
PTCH1-226ENST00000553011 NR2E3Q9Y5X4 410 aa16.05■□□□□ 0.16
PTCH1-226ENST00000553011 H0YGN5 161 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
PTCH1-226ENST00000553011 TDP2O95551 362 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 CDK7P50613 346 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 CHMP4BP1P59074 171 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 SLC43A3Q8NBI5 491 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 GIMAP8Q8ND71 665 aaPredicted RBP16.04■□□□□ 0.16
PTCH1-226ENST00000553011 FBXO18Q8NFZ0 1043 aa16.04■□□□□ 0.16
PTCH1-226ENST00000553011 LTBP2Q14767 1821 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 NFASCO94856 1347 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 DDX39AO00148 427 aaKnown RBP16.03■□□□□ 0.16
PTCH1-226ENST00000553011 PPFIA4O75335 1185 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 SYN1P17600 705 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 GJB2P29033 226 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 SETQ01105 290 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-226ENST00000553011 CUL4AQ13619 759 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 LETM2Q2VYF4 491 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 NBPF20Q3BBV1 942 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 JPH1Q9HDC5 661 aaPredicted RBP16.03■□□□□ 0.16
PTCH1-226ENST00000553011 SMC3Q9UQE7 1217 aa16.03■□□□□ 0.16
PTCH1-226ENST00000553011 TRIOBPQ9H2D6 2365 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 CYP3A7-CYP3A51PA0A087WV96 503 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 GSTTP1A0A1W2PQM5 241 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 IPO5O00410 1097 aaKnown RBP16.02■□□□□ 0.16
PTCH1-226ENST00000553011 MSH4O15457 936 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 DHX15O43143 795 aaKnown RBP16.02■□□□□ 0.16
PTCH1-226ENST00000553011 F2P00734 622 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 LGALS2P05162 132 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 CYP3A7P24462 503 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 PSEN2P49810 448 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 SAFBQ15424 915 aaKnown RBP eCLIP16.02■□□□□ 0.16
PTCH1-226ENST00000553011 UTP14CQ5TAP6 766 aaKnown RBP16.02■□□□□ 0.16
PTCH1-226ENST00000553011 ANKRD33Q7Z3H0 272 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 SH3RF1Q7Z6J0 888 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 NEK8Q86SG6 692 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 TRIM50Q86XT4 487 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 MBOAT7Q96N66 472 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 SDF4Q9BRK5 362 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 ZNF577Q9BSK1 485 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 C16orf70Q9BSU1 422 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 PDLIM7Q9NR12 457 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 SLC9A2Q9UBY0 812 aa16.02■□□□□ 0.16
PTCH1-226ENST00000553011 DCDC2CA8MYV0 355 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 K7ELQ4 463 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-226ENST00000553011 SLC37A4O43826 429 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 TCF7P36402 384 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-226ENST00000553011 MFSD10Q14728 455 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 Q4G0T1 1027 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 FAM47CQ5HY64 1035 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 MOXD1Q6UVY6 613 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 FAM126BQ8IXS8 530 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 SEPT1Q8WYJ6 367 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 GJA10Q969M2 543 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 TOX2Q96NM4 488 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 PRDM5Q9NQX1 630 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-226ENST00000553011 KIF3AQ9Y496 699 aa16.01■□□□□ 0.15
PTCH1-226ENST00000553011 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.01■□□□□ 0.15
PTCH1-226ENST00000553011 MROH7Q68CQ1 1323 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 KIF28PB7ZC32 967 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 HAS3O00219 553 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 CCNE2O96020 404 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 CLTBP09497 229 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 ACTR2P61160 394 aa16■□□□□ 0.15
PTCH1-226ENST00000553011 FAAP100Q0VG06 881 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms