RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 DGKDQ16760 1214 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 C7orf61Q8IZ16 206 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 SPATA33Q96N06 139 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 MTG1Q9BT17 334 aaPredicted RBP13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 KCNH7Q9NS40 1196 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 GJB4Q9NTQ9 266 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 NR2E3Q9Y5X4 410 aa13.34□□□□□ -0.27
TRAFD1-209ENST00000552896 FAM86B1E9PN63 330 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 MYL3P08590 195 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 FAM86B2P0C5J1 330 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 KRT2P35908 639 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 ZNF76P36508 570 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 USP11P51784 963 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 HSDL1Q3SXM5 330 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 ANKRD33Q7Z3H0 272 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 SLC43A3Q8NBI5 491 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 TBCKQ8TEA7 893 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 ATP11BQ9Y2G3 1177 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 KIF3AQ9Y496 699 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 NFASCO94856 1347 aa13.33□□□□□ -0.28
TRAFD1-209ENST00000552896 CCDC194A0A1B0GVG4 234 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 ARVCFO00192 962 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 F2P00734 622 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 ITGA7Q13683 1181 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 KRT40Q6A162 431 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 MOXD1Q6UVY6 613 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 CYFIP1Q7L576 1253 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 PLA2G4DQ86XP0 818 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 FAM184AQ8NB25 1140 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 CYP2W1Q8TAV3 490 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 OXER1Q8TDS5 423 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 TNFRSF25Q93038 417 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 LENG9Q96B70 501 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 C8orf76Q96K31 380 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 TOX2Q96NM4 488 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 KATNAL1Q9BW62 490 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 AGO4Q9HCK5 861 aaKnown RBP13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 ARID2Q68CP9 1835 aa13.32□□□□□ -0.28
TRAFD1-209ENST00000552896 SORBS3O60504 671 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 ATP9AO75110 1047 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 PPFIA4O75335 1185 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 ZNF286BP0CG31 522 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 ARP10275 920 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 CDK7P50613 346 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 NFRKBQ6P4R8 1299 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 DIS3L2Q8IYB7 885 aaKnown RBP13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 VTI1AQ96AJ9 217 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 GPR20Q99678 358 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 SDF4Q9BRK5 362 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 JPH1Q9HDC5 661 aaPredicted RBP13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 PDLIM7Q9NR12 457 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 GRIN2DO15399 1336 aa13.31□□□□□ -0.28
TRAFD1-209ENST00000552896 SIP14410 1827 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 CYP3A7-CYP3A51PA0A087WV96 503 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 HAX1O00165 279 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 IPO5O00410 1097 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PQBP1O60828 265 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 LGALS2P05162 132 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 CLTBP09497 229 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 GCFC2P16383 781 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 CYP3A7P24462 503 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 FOSBP53539 338 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PSMC6P62333 389 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 TLE2Q04725 743 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PTPN11Q06124 597 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 NR5A1Q13285 461 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 ITGB3BPQ13352 177 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 SAFBQ15424 915 aaKnown RBP eCLIP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 INF2Q27J81 1249 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PRR16Q569H4 304 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PIK3AP1Q6ZUJ8 805 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 NEK8Q86SG6 692 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 SESTD1Q86VW0 696 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 FAM126BQ8IXS8 530 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 FBXO18Q8NFZ0 1043 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 KAT2BQ92831 832 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 MBOAT7Q96N66 472 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 NAP1L4Q99733 375 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 BCAS3Q9H6U6 928 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 PKD2L1Q9P0L9 805 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 SLC9A2Q9UBY0 812 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 EMSYQ7Z589 1322 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 SCN5AQ14524 2016 aa13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 RANBP2P49792 3224 aaKnown RBP13.3□□□□□ -0.28
TRAFD1-209ENST00000552896 DCDC2CA8MYV0 355 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 H0YGN5 161 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 HAS3O00219 553 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 TLR3O15455 904 aaKnown RBP13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 EDIL3O43854 480 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 SP4Q02446 784 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 CUL4AQ13619 759 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 NBPF20Q3BBV1 942 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 Q4G0T1 1027 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 ZNF577Q9BSK1 485 aa13.29□□□□□ -0.28
TRAFD1-209ENST00000552896 C16orf70Q9BSU1 422 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms