RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
CKAP4-202ENST00000552828 BCAS3Q9H6U6 928 aa13.71□□□□□ -0.21
CKAP4-202ENST00000552828 MLXIPQ9HAP2 919 aa13.71□□□□□ -0.21
CKAP4-202ENST00000552828 MTUS1Q9ULD2 1270 aa13.71□□□□□ -0.21
CKAP4-202ENST00000552828 C17orf102A2RUQ5 167 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 AMHP03971 560 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 LGALS2P05162 132 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 SMIM10L2AP0DMW4 78 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 SMIM10L2BP0DMW5 78 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
CKAP4-202ENST00000552828 TRDNQ13061 729 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 HOMER1Q86YM7 354 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 RNPEPQ9H4A4 650 aa13.7□□□□□ -0.22
CKAP4-202ENST00000552828 U3KPZ7 1027 aaPredicted RBP13.7□□□□□ -0.22
CKAP4-202ENST00000552828 TCF20Q9UGU0 1960 aaKnown RBP13.7□□□□□ -0.22
CKAP4-202ENST00000552828 TREHO43280 583 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 SORBS3O60504 671 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 CYP21A2P08686 494 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 NEDD9Q14511 834 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 GNPTABQ3T906 1256 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 LEXMQ3ZCV2 418 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 FAM117BQ6P1L5 589 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 FCHSD1Q86WN1 690 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 TOP1MTQ969P6 601 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 C17orf80Q9BSJ5 609 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 LRFN3Q9BTN0 628 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 UBE2ZQ9H832 354 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-202ENST00000552828 SENP2Q9HC62 589 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 BRWD1Q9NSI6 2320 aa13.69□□□□□ -0.22
CKAP4-202ENST00000552828 COL4A4P53420 1690 aaPredicted RBP13.69□□□□□ -0.22
CKAP4-202ENST00000552828 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 IFIT3O14879 490 aaKnown RBP13.68□□□□□ -0.22
CKAP4-202ENST00000552828 GPR37L1O60883 481 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 GNAT1P11488 350 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 ADAM17P78536 824 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 SEMA3FQ13275 785 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 XRRA1Q6P2D8 792 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 MYOCDQ8IZQ8 938 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 FBXO22Q8NEZ5 403 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 SEPT8Q92599 483 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 KHSRPQ92945 711 aaKnown RBP eCLIP13.68□□□□□ -0.22
CKAP4-202ENST00000552828 MRPL38Q96DV4 380 aaKnown RBP13.68□□□□□ -0.22
CKAP4-202ENST00000552828 FAM122AQ96E09 287 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 ZFP91Q96JP5 570 aaPredicted RBP13.68□□□□□ -0.22
CKAP4-202ENST00000552828 SAMD11Q96NU1 681 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 MAP3K14Q99558 947 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 GPR20Q99678 358 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 CD320Q9NPF0 282 aa13.68□□□□□ -0.22
CKAP4-202ENST00000552828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.67□□□□□ -0.22
CKAP4-202ENST00000552828 ERICH2A1L162 156 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 PI4K2BG5E9Z4 385 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 PIK3CDO00329 1044 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 NOP56O00567 594 aaKnown RBP13.67□□□□□ -0.22
CKAP4-202ENST00000552828 SGSM2O43147 1006 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 FIBPO43427 364 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 SMARCA1P28370 1054 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 PTH1RQ03431 593 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 COL19A1Q14993 1142 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 WTAPQ15007 396 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 SART3Q15020 963 aaKnown RBP13.67□□□□□ -0.22
CKAP4-202ENST00000552828 EPC2Q52LR7 807 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 FAM26DQ5JW98 314 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 TMEM31Q5JXX7 168 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 CASC1Q6TDU7 716 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 CYFIP1Q7L576 1253 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.67□□□□□ -0.22
CKAP4-202ENST00000552828 IGDCC4Q8TDY8 1250 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 OSBPL7Q9BZF2 842 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 C11orf16Q9NQ32 467 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 TAF6LQ9Y6J9 622 aa13.67□□□□□ -0.22
CKAP4-202ENST00000552828 COL4A6Q14031 1691 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 E7EWF7 191 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 H3BNC9 293 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 PTPROQ16827 1216 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 PCNX4Q63HM2 1172 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 CATIPQ7Z7H3 387 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 FAM178BQ8IXR5 827 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 NCOA7Q8NI08 942 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 NEK9Q8TD19 979 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 APBB2Q92870 758 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 SPZ1Q9BXG8 430 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 SETD4Q9NVD3 440 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 MYH6P13533 1939 aa13.66□□□□□ -0.22
CKAP4-202ENST00000552828 MEIS2O14770 477 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 CDC45O75419 566 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 KCNA5P22460 613 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 ANTXR2P58335 489 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 PUS10Q3MIT2 529 aaKnown RBP13.65□□□□□ -0.22
CKAP4-202ENST00000552828 RALYLQ86SE5 291 aaKnown RBP13.65□□□□□ -0.22
CKAP4-202ENST00000552828 MB21D2Q8IYB1 491 aaPredicted RBP13.65□□□□□ -0.22
CKAP4-202ENST00000552828 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.22
CKAP4-202ENST00000552828 LMBR1Q8WVP7 490 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 YME1L1Q96TA2 773 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 MTA3Q9BTC8 594 aa13.65□□□□□ -0.22
CKAP4-202ENST00000552828 RTEL1Q9NZ71 1219 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms