RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 SERINC5Q86VE9 423 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 C16orf70Q9BSU1 422 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 MTUS1Q9ULD2 1270 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 TAF6LQ9Y6J9 622 aa12.55□□□□□ -0.4
PFDN5-210ENST00000550513 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 LINC01553A4QN01 128 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 H3BRB1 525 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 SGSM2O43147 1006 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 COL9A1P20849 921 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 FAM117BQ6P1L5 589 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 PIBF1Q8WXW3 757 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 INPP4AQ96PE3 977 aaPredicted RBP12.54□□□□□ -0.4
PFDN5-210ENST00000550513 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
PFDN5-210ENST00000550513 RAD9AQ99638 391 aa12.54□□□□□ -0.4
PFDN5-210ENST00000550513 TUT1Q9H6E5 874 aaKnown RBP12.54□□□□□ -0.4
PFDN5-210ENST00000550513 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
PFDN5-210ENST00000550513 RSPH10B2B2RC85 870 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 FIBPO43427 364 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 DDAH1O94760 285 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 AMHP03971 560 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 RSPH10BP0C881 870 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 SMIM10L2AP0DMW4 78 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 SMIM10L2BP0DMW5 78 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 HOXC8P31273 242 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 ICAM3P32942 547 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 ANTXR2P58335 489 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 MRPS9P82933 396 aaKnown RBP12.53□□□□□ -0.4
PFDN5-210ENST00000550513 NEDD9Q14511 834 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 METTL7BQ6UX53 244 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 MB21D2Q8IYB1 491 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-210ENST00000550513 ZNF654Q8IZM8 581 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 MYOCDQ8IZQ8 938 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-210ENST00000550513 SMARCC2Q8TAQ2 1214 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 HLA-CQ95604 372 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 SPZ1Q9BXG8 430 aa12.53□□□□□ -0.4
PFDN5-210ENST00000550513 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
PFDN5-210ENST00000550513 RBAK-RBAKDNI3L0D1 243 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 TREHO43280 583 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 CAND2O75155 1236 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 CTSHP09668 335 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 KIF5BP33176 963 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 ERVK-21P61565 698 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 PLEKHG4Q58EX7 1191 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 CASC1Q6TDU7 716 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.52□□□□□ -0.412e-15■■■■■ 45
PFDN5-210ENST00000550513 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 TRIM50Q86XT4 487 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 DBF4BQ8NFT6 615 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 CUL5Q93034 780 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 RRP36Q96EU6 259 aaKnown RBP12.52□□□□□ -0.41
PFDN5-210ENST00000550513 MYL10Q9BUA6 226 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 USP26Q9BXU7 913 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 SUGCTQ9HAC7 445 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 RTEL1Q9NZ71 1219 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 LMCD1Q9NZU5 365 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 ZNF215Q9UL58 517 aaPredicted RBP12.52□□□□□ -0.41
PFDN5-210ENST00000550513 INSL6Q9Y581 213 aa12.52□□□□□ -0.41
PFDN5-210ENST00000550513 RBM8AQ9Y5S9 174 aaKnown RBP12.52□□□□□ -0.41
PFDN5-210ENST00000550513 PLXNA4Q9HCM2 1894 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 EVPLQ92817 2033 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 SPATA31C2B4DYI2 1134 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 SP4Q02446 784 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 SEMA3FQ13275 785 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 MKRN4PQ13434 485 aaPredicted RBP12.51□□□□□ -0.41
PFDN5-210ENST00000550513 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 FBXO22Q8NEZ5 403 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 IGDCC4Q8TDY8 1250 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 SEPT8Q92599 483 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 MAP3K14Q99558 947 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 GPR20Q99678 358 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 RNPEPQ9H4A4 650 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 BCAS3Q9H6U6 928 aa12.51□□□□□ -0.41
PFDN5-210ENST00000550513 SUPT16HQ9Y5B9 1047 aaKnown RBP12.51□□□□□ -0.41
PFDN5-210ENST00000550513 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 PRC1O43663 620 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 GNAT1P11488 350 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 HTRA4P83105 476 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-210ENST00000550513 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
PFDN5-210ENST00000550513 USP17L6PQ6QN14 398 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 NFXL1Q6ZNB6 911 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 NLRX1Q86UT6 975 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 LMBR1Q8WVP7 490 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 MAP4K1Q92918 833 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 C17orf80Q9BSJ5 609 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 C1QTNF1Q9BXJ1 281 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 FNDC1Q4ZHG4 1894 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-210ENST00000550513 TTC3P53804 2025 aa12.5□□□□□ -0.41
PFDN5-210ENST00000550513 CCDC69A6NI79 296 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 MEIS2O14770 477 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 SMARCA1P28370 1054 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 IRX6P78412 446 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-210ENST00000550513 ARHGAP4P98171 946 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 XRRA1Q6P2D8 792 aa12.49□□□□□ -0.41
PFDN5-210ENST00000550513 GIMAP8Q8ND71 665 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-210ENST00000550513 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
PFDN5-210ENST00000550513 APBB2Q92870 758 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms