RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 SMIM10L2BP0DMW5 78 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 PDE4AP27815 886 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 SMARCA1P28370 1054 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 GNAQP50148 359 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 TRAF7Q6Q0C0 670 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 GIMAP8Q8ND71 665 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 DBF4BQ8NFT6 615 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 PIBF1Q8WXW3 757 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 SEPT8Q92599 483 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 ZFP91Q96JP5 570 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 INPP4AQ96PE3 977 aaPredicted RBP26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 MTUS1Q9ULD2 1270 aa26.62■■□□□ 1.85
SMARCD1-209ENST00000550477 CHD7Q9P2D1 2997 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 CYFIP1Q7L576 1253 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 MYOCDQ8IZQ8 938 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 GDPD5Q8WTR4 605 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 MTA3Q9BTC8 594 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 RNPEPQ9H4A4 650 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 RTEL1Q9NZ71 1219 aa26.61■■□□□ 1.85
SMARCD1-209ENST00000550477 LINC01553A4QN01 128 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 SPATA31C2B4DYI2 1134 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 SGSM2O43147 1006 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 LPXNO60711 386 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 DDAH1O94760 285 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 GPKOWQ92917 476 aaPredicted RBP eCLIP26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 WNT8BQ93098 351 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 SPZ1Q9BXG8 430 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 SUGCTQ9HAC7 445 aa26.6■■□□□ 1.85
SMARCD1-209ENST00000550477 PTPRSQ13332 1948 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 MRPS9P82933 396 aaKnown RBP26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 MBTPS1Q14703 1052 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 PLEKHG4Q58EX7 1191 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 NFXL1Q6ZNB6 911 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 IGDCC4Q8TDY8 1250 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 MAP4K1Q92918 833 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 CDHR1Q96JP9 859 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 SAMD11Q96NU1 681 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 NECAB3Q96P71 396 aaPredicted RBP26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 SENP7Q9BQF6 1050 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 SENP2Q9HC62 589 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 SUPT16HQ9Y5B9 1047 aaKnown RBP26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 FRMPD4Q14CM0 1322 aa26.59■■□□□ 1.85
SMARCD1-209ENST00000550477 TREHO43280 583 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 SLC35G1Q2M3R5 365 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 PCNX4Q63HM2 1172 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 LIN28BQ6ZN17 250 aaKnown RBP eCLIP26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 ZNF654Q8IZM8 581 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 FBXO22Q8NEZ5 403 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 GPR20Q99678 358 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 KAT6AQ92794 2004 aa26.58■■□□□ 1.85
SMARCD1-209ENST00000550477 CCDC69A6NI79 296 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 PIK3CDO00329 1044 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 CALM1P0DP23 149 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 CALM2P0DP24 149 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 CALM3P0DP25 149 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 HOXC8P31273 242 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 HIC1Q14526 733 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 PTPROQ16827 1216 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 TCTN1Q2MV58 587 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 APBB2Q92870 758 aa26.57■■□□□ 1.84
SMARCD1-209ENST00000550477 MCM5P33992 734 aa26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 UTP14CQ5TAP6 766 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 SPRED2Q7Z698 418 aa26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 MB21D2Q8IYB1 491 aaPredicted RBP26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 TMEM87BQ96K49 555 aa26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 YME1L1Q96TA2 773 aa26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 SETD4Q9NVD3 440 aa26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 RBM8AQ9Y5S9 174 aaKnown RBP26.56■■□□□ 1.84
SMARCD1-209ENST00000550477 HTRA4P83105 476 aaPredicted RBP26.55■■□□□ 1.84
SMARCD1-209ENST00000550477 RSPH3Q86UC2 560 aa26.55■■□□□ 1.84
SMARCD1-209ENST00000550477 NRCAMQ92823 1304 aa26.55■■□□□ 1.84
SMARCD1-209ENST00000550477 CTSHP09668 335 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 ANTXR2P58335 489 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 ARHGAP4P98171 946 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 USP17L6PQ6QN14 398 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 TOP1MTQ969P6 601 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 BCAS3Q9H6U6 928 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 PSTPIP2Q9H939 334 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 LY9Q9HBG7 655 aa26.54■■□□□ 1.84
SMARCD1-209ENST00000550477 MICAL3Q7RTP6 2002 aa26.53■■□□□ 1.84
SMARCD1-209ENST00000550477 PRC1O43663 620 aa26.53■■□□□ 1.84
SMARCD1-209ENST00000550477 SP4Q02446 784 aa26.53■■□□□ 1.84
SMARCD1-209ENST00000550477 GPRASP2Q96D09 838 aa26.53■■□□□ 1.84
SMARCD1-209ENST00000550477 SIP14410 1827 aa26.53■■□□□ 1.84
SMARCD1-209ENST00000550477 MUC3AQ02505 3323 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 UPP2O95045 317 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 SEMA3FQ13275 785 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 TAF2Q6P1X5 1199 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 SP7Q8TDD2 431 aaPredicted RBP26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 TNPO1Q92973 898 aaKnown RBP26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 MYL10Q9BUA6 226 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 EHMT1Q9H9B1 1298 aa26.52■■□□□ 1.84
SMARCD1-209ENST00000550477 COL4A4P53420 1690 aaPredicted RBP26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 SPDYE3A6NKU9 549 aa26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 MEIS2O14770 477 aa26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 MAFGO15525 162 aa26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 SEPT1Q8WYJ6 367 aa26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 C17orf80Q9BSJ5 609 aa26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 IFIH1Q9BYX4 1025 aaKnown RBP26.51■■□□□ 1.83
SMARCD1-209ENST00000550477 UBE2ZQ9H832 354 aaPredicted RBP26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms