RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, human

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT2-222	ENST00000550155	TMEM209	Q96SK2	561 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	KCNJ15	Q99712	375 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	LNPK	Q9C0E8	428 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	CDIP1	Q9H305	208 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	ASH2L	Q9UBL3	628 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	MSRB2	Q9Y3D2	182 aa		7.16	□□□□□ -1.26
CNOT2-222	ENST00000550155	BLACE	A4D250	179 aa		7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	FAM47E-STBD1	D6RA91	191 aa		7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	PRICKLE3	O43900	615 aa	Predicted RBP	7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	YOD1	Q5VVQ6	348 aa	Predicted RBP	7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	MCTP2	Q6DN12	878 aa		7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	OTOP3	Q7RTS5	596 aa		7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	L2HGDH	Q9H9P8	463 aa		7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	PPARGC1A	Q9UBK2	798 aa	Known RBP	7.15	□□□□□ -1.26
CNOT2-222	ENST00000550155	MROH6	A6NGR9	719 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	SLC27A2	O14975	620 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	LRG1	P02750	347 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	SOD2	P04179	222 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	CYP1A1	P04798	512 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	APP	P05067	770 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	NTRK3	Q16288	839 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	SKOR2	Q2VWA4	1001 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	SPATC1	Q76KD6	591 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	PRRT2	Q7Z6L0	340 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	ARMC5	Q96C12	935 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	LCOR	Q96JN0	433 aa	Predicted RBP	7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	KRTAP4-9	Q9BYQ8	210 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	PFDN2	Q9UHV9	154 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	CROT	Q9UKG9	612 aa		7.14	□□□□□ -1.27
CNOT2-222	ENST00000550155	TRBV23-1	A0A0A0MS06	115 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	AQP7	O14520	342 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	COL6A2	P12110	1019 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	SUMO1	P63165	101 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	ADAM9	Q13443	819 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	LGI4	Q8N135	537 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	TXNDC5	Q8NBS9	432 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	TTLL11	Q8NHH1	800 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	HSPBP1	Q9NZL4	362 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	CNOT11	Q9UKZ1	510 aa	Known RBP	7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155	DSE	Q9UL01	958 aa		7.13	□□□□□ -1.27
CNOT2-222	ENST00000550155		K7ESM1	405 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	NAT1	P18440	290 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	IL13	P35225	146 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	GRIN1	Q05586	938 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	TUSC3	Q13454	348 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	PRR31	Q5SQ13	230 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	SOGA3	Q5TF21	947 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	VASN	Q6EMK4	673 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	TMC5	Q6UXY8	1006 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	MAMDC2	Q7Z304	686 aa	Predicted RBP	7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	MTDH	Q86UE4	582 aa	Known RBP	7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	ZSWIM3	Q96MP5	696 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	TMEM168	Q9H0V1	697 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	DUSP10	Q9Y6W6	482 aa		7.12	□□□□□ -1.27
CNOT2-222	ENST00000550155	C9orf118	A6NHY6	69 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	PAK1	Q13153	545 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	EP400NL	Q6ZTU2	488 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	UHMK1	Q8TAS1	419 aa	Known RBP	7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	CLEC4D	Q8WXI8	215 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	PTPRN2	Q92932	1015 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	FTSJ1	Q9UET6	329 aa		7.11	□□□□□ -1.27
CNOT2-222	ENST00000550155	ADCY3	O60266	1144 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	ZNF28	P17035	718 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	SPATS1	Q496A3	300 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	LRP10	Q7Z4F1	713 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	IPPK	Q9H8X2	491 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	TRAF6	Q9Y4K3	522 aa		7.1	□□□□□ -1.27
CNOT2-222	ENST00000550155	ZNF536	O15090	1300 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	KDM2B	Q8NHM5	1336 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	NKRF	O15226	690 aa	Known RBP eCLIP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	FBXO21	O94952	628 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	SF3A1	Q15459	793 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	SURF1	Q15526	300 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	LONRF2	Q1L5Z9	754 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	PAN2	Q504Q3	1202 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	ZC3H12B	Q5HYM0	836 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	FAM209A	Q5JX71	171 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	TRMT10B	Q6PF06	316 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	PLEKHH3	Q7Z736	793 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	RBM12B	Q8IXT5	1001 aa	Known RBP	7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	BORCS6	Q96GS4	357 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	DLL4	Q9NR61	685 aa		7.09	□□□□□ -1.27
CNOT2-222	ENST00000550155	ASXL2	Q76L83	1435 aa		7.09	□□□□□ -1.28
CNOT2-222	ENST00000550155	GSTA4	O15217	222 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	ENO2	P09104	434 aa	Predicted RBP	7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	FAH	P16930	419 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	MLLT6	P55198	1093 aa	Predicted RBP	7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	GABRE	P78334	506 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	GUCY1A3	Q02108	690 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	RBL2	Q08999	1139 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	ZNF827	Q17R98	1081 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	KCTD1	Q719H9	257 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	NLGN4X	Q8N0W4	816 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	DEPDC7	Q96QD5	511 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	DHRS4	Q9BTZ2	278 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	BARX1	Q9HBU1	254 aa	Predicted RBP	7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	CATSPERZ	Q9NTU4	200 aa		7.08	□□□□□ -1.28
CNOT2-222	ENST00000550155	INVS	Q9Y283	1065 aa		7.08	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms