RNA–Protein interactions for RNA: ENST00000550155.5

CNOT2-222, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 842 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-222ENST00000550155 AEBP2Q6ZN18 517 aaPredicted RBP28.57■■■□□ 2.16
CNOT2-222ENST00000550155 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
CNOT2-222ENST00000550155 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
CNOT2-222ENST00000550155 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
CNOT2-222ENST00000550155 FOXD1Q16676 465 aa22.64■■□□□ 1.21
CNOT2-222ENST00000550155 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
CNOT2-222ENST00000550155 ADRA2BP18089 450 aa21.51■■□□□ 1.03
CNOT2-222ENST00000550155 PPP6R1Q9UPN7 881 aa21.5■■□□□ 1.03
CNOT2-222ENST00000550155 PIAS4Q8N2W9 510 aaPredicted RBP21.34■■□□□ 1.01
CNOT2-222ENST00000550155 MSH5O43196 834 aa21.1■□□□□ 0.97
CNOT2-222ENST00000550155 SCAF1Q9H7N4 1312 aaKnown RBP19.83■□□□□ 0.77
CNOT2-222ENST00000550155 PPP4R3CPQ6ZMV5 832 aa19.67■□□□□ 0.74
CNOT2-222ENST00000550155 POTEDQ86YR6 584 aa19.67■□□□□ 0.74
CNOT2-222ENST00000550155 MAPK8IP2Q13387 824 aaPredicted RBP19.59■□□□□ 0.73
CNOT2-222ENST00000550155 DMRT2Q9Y5R5 561 aa19.41■□□□□ 0.7
CNOT2-222ENST00000550155 CNKSR2Q8WXI2 1034 aa19.22■□□□□ 0.67
CNOT2-222ENST00000550155 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
CNOT2-222ENST00000550155 RNF216Q9NWF9 866 aaPredicted RBP18.91■□□□□ 0.62
CNOT2-222ENST00000550155 HOXD11P31277 338 aaPredicted RBP18.87■□□□□ 0.61
CNOT2-222ENST00000550155 KCNA4P22459 653 aa18.82■□□□□ 0.6
CNOT2-222ENST00000550155 NPM3O75607 178 aaKnown RBP18.76■□□□□ 0.59
CNOT2-222ENST00000550155 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
CNOT2-222ENST00000550155 DNAJC5BQ9UF47 199 aa18.25■□□□□ 0.51
CNOT2-222ENST00000550155 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.09■□□□□ 0.499e-7■□□□□ 9.1
CNOT2-222ENST00000550155 RNF39Q9H2S5 420 aa17.98■□□□□ 0.47
CNOT2-222ENST00000550155 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
CNOT2-222ENST00000550155 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
CNOT2-222ENST00000550155 C1QBPQ07021 282 aaKnown RBP17.81■□□□□ 0.44
CNOT2-222ENST00000550155 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
CNOT2-222ENST00000550155 U3KPZ7 1027 aaPredicted RBP17.65■□□□□ 0.42
CNOT2-222ENST00000550155 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.47■□□□□ 0.39
CNOT2-222ENST00000550155 HNRNPUL2Q1KMD3 747 aaKnown RBP17.47■□□□□ 0.39
CNOT2-222ENST00000550155 FOXD4L1Q9NU39 408 aa17.46■□□□□ 0.39
CNOT2-222ENST00000550155 MYCNP04198 464 aaPredicted RBP17.4■□□□□ 0.38
CNOT2-222ENST00000550155 APLP2Q06481 763 aa17.4■□□□□ 0.38
CNOT2-222ENST00000550155 SAMD1Q6SPF0 538 aaPredicted RBP17.36■□□□□ 0.37
CNOT2-222ENST00000550155 CAPN15O75808 1086 aa17.3■□□□□ 0.36
CNOT2-222ENST00000550155 ZBTB22O15209 634 aa17.25■□□□□ 0.35
CNOT2-222ENST00000550155 SPINK5Q9NQ38 1064 aaPredicted RBP17.25■□□□□ 0.35
CNOT2-222ENST00000550155 ZNF219Q9P2Y4 722 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-222ENST00000550155 TRHP20396 242 aaPredicted RBP17.12■□□□□ 0.33
CNOT2-222ENST00000550155 EHMT2Q96KQ7 1210 aa17.06■□□□□ 0.32
CNOT2-222ENST00000550155 DSG3P32926 999 aa16.99■□□□□ 0.31
CNOT2-222ENST00000550155 CSRNP3Q8WYN3 585 aa16.94■□□□□ 0.3
CNOT2-222ENST00000550155 ATXN8OSP0DMR3 200 aa16.91■□□□□ 0.3
CNOT2-222ENST00000550155 ABCB7O75027 752 aa16.88■□□□□ 0.29
CNOT2-222ENST00000550155 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
CNOT2-222ENST00000550155 POLA2Q14181 598 aa16.76■□□□□ 0.27
CNOT2-222ENST00000550155 ZBTB12Q9Y330 459 aaPredicted RBP16.54■□□□□ 0.24
CNOT2-222ENST00000550155 FBLN2P98095 1184 aa16.35■□□□□ 0.21
CNOT2-222ENST00000550155 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
CNOT2-222ENST00000550155 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
CNOT2-222ENST00000550155 MKRN4PQ13434 485 aaPredicted RBP16.11■□□□□ 0.17
CNOT2-222ENST00000550155 SPDYE2BA6NHP3 402 aa16.01■□□□□ 0.15
CNOT2-222ENST00000550155 SPDYE6P0CI01 402 aa16.01■□□□□ 0.15
CNOT2-222ENST00000550155 SPDYE2Q495Y8 402 aa16.01■□□□□ 0.15
CNOT2-222ENST00000550155 AKT1S1Q96B36 256 aa16■□□□□ 0.15
CNOT2-222ENST00000550155 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
CNOT2-222ENST00000550155 REM2Q8IYK8 340 aaPredicted RBP15.82■□□□□ 0.12
CNOT2-222ENST00000550155 SSUH2Q9Y2M2 353 aa15.78■□□□□ 0.12
CNOT2-222ENST00000550155 SPDYE4A6NLX3 237 aa15.7■□□□□ 0.1
CNOT2-222ENST00000550155 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
CNOT2-222ENST00000550155 PABPN1Q86U42 306 aaKnown RBP eCLIP15.67■□□□□ 0.1
CNOT2-222ENST00000550155 SPDYE1Q8NFV5 336 aaPredicted RBP15.64■□□□□ 0.09
CNOT2-222ENST00000550155 PITPNM1O00562 1244 aa15.62■□□□□ 0.09
CNOT2-222ENST00000550155 CLEC11AQ9Y240 323 aa15.58■□□□□ 0.08
CNOT2-222ENST00000550155 POTEHQ6S545 545 aa15.55■□□□□ 0.08
CNOT2-222ENST00000550155 STAG3Q9UJ98 1225 aa15.42■□□□□ 0.06
CNOT2-222ENST00000550155 PRR29P0C7W0 189 aa15.41■□□□□ 0.06
CNOT2-222ENST00000550155 FKBP8Q14318 412 aa15.41■□□□□ 0.06
CNOT2-222ENST00000550155 PIP4P2Q8N4L2 257 aa15.4■□□□□ 0.06
CNOT2-222ENST00000550155 FXR2P51116 673 aaKnown RBP eCLIP15.38■□□□□ 0.05
CNOT2-222ENST00000550155 PROM2Q8N271 834 aa15.3■□□□□ 0.04
CNOT2-222ENST00000550155 PRKAR2AP13861 404 aaKnown RBP15.26■□□□□ 0.03
CNOT2-222ENST00000550155 CHADLQ6NUI6 762 aa15.16■□□□□ 0.02
CNOT2-222ENST00000550155 HAX1O00165 279 aa15.08■□□□□ 0
CNOT2-222ENST00000550155 CREBZFQ9NS37 354 aa15.04■□□□□ -0
CNOT2-222ENST00000550155 FBXO3Q9UK99 471 aa15.04■□□□□ -0
CNOT2-222ENST00000550155 FARP1Q9Y4F1 1045 aaPredicted RBP15.03■□□□□ -0
CNOT2-222ENST00000550155 PLEKHG5O94827 1062 aa15.01□□□□□ -0.01
CNOT2-222ENST00000550155 MIER1Q8N108 512 aa14.98□□□□□ -0.01
CNOT2-222ENST00000550155 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
CNOT2-222ENST00000550155 NPM1P06748 294 aaKnown RBP eCLIP14.91□□□□□ -0.02
CNOT2-222ENST00000550155 C19orf67A6NJJ6 358 aa14.88□□□□□ -0.03
CNOT2-222ENST00000550155 CD44P16070 742 aaKnown RBP14.82□□□□□ -0.04
CNOT2-222ENST00000550155 ZBTB47Q9UFB7 747 aaPredicted RBP14.82□□□□□ -0.04
CNOT2-222ENST00000550155 SP7Q8TDD2 431 aaPredicted RBP14.81□□□□□ -0.04
CNOT2-222ENST00000550155 MNX1P50219 401 aaPredicted RBP14.8□□□□□ -0.04
CNOT2-222ENST00000550155 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.05
CNOT2-222ENST00000550155 EVX2Q03828 476 aa14.77□□□□□ -0.05
CNOT2-222ENST00000550155 VASPP50552 380 aaPredicted RBP14.75□□□□□ -0.05
CNOT2-222ENST00000550155 ZRANB1Q9UGI0 708 aa14.7□□□□□ -0.06
CNOT2-222ENST00000550155 KLHL34Q8N239 644 aa14.66□□□□□ -0.06
CNOT2-222ENST00000550155 CLCN6P51797 869 aa14.6□□□□□ -0.07
CNOT2-222ENST00000550155 TSPYL2Q9H2G4 693 aaPredicted RBP14.6□□□□□ -0.07
CNOT2-222ENST00000550155 ZNF579Q8NAF0 562 aaKnown RBP14.58□□□□□ -0.08
CNOT2-222ENST00000550155 GABBR2O75899 941 aa14.55□□□□□ -0.08
CNOT2-222ENST00000550155 RASEFQ8IZ41 740 aa14.53□□□□□ -0.08
CNOT2-222ENST00000550155 NUBP1P53384 320 aa14.52□□□□□ -0.09
CNOT2-222ENST00000550155 FAM212AQ96EL1 285 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms