RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GGPS1O95749 300 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 MYCLP12524 364 aaPredicted RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 KCNA5P22460 613 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 THPOP40225 353 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PLCB2Q00722 1185 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 AAMPQ13685 434 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 COL19A1Q14993 1142 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PGM5Q15124 567 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PTPROQ16827 1216 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 IMMTQ16891 758 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 FAM117BQ6P1L5 589 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PLEKHM2Q8IWE5 1019 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 SMC5Q8IY18 1101 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 STAG2Q8N3U4 1231 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 NEK9Q8TD19 979 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 LNPKQ9C0E8 428 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 TUT1Q9H6E5 874 aaKnown RBP11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 CNNM2Q9H8M5 875 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 PCDHA1Q9Y5I3 950 aa11.45□□□□□ -0.58
TRAFD1-207ENST00000550051 C17orf102A2RUQ5 167 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 PRR33A8MZF0 331 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 H3BNC9 293 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 HIP1O00291 1037 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 ALADP13716 330 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 RRP1P56182 461 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 SEC23AQ15436 765 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 EPC2Q52LR7 807 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 IFIT1BQ5T764 474 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 PTCRAQ6ISU1 281 aaPredicted RBP11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 CWC27Q6UX04 472 aaKnown RBP11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 SEPT8Q92599 483 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 ATP6V0A1Q93050 837 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 UBAC1Q9BSL1 405 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 USP26Q9BXU7 913 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 RNPEPQ9H4A4 650 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 RIOX1Q9H6W3 641 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 MLXIPQ9HAP2 919 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 MAD2L2Q9UI95 211 aa11.44□□□□□ -0.58
TRAFD1-207ENST00000550051 POTEB3A0JP26 581 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 SPATA31C2B4DYI2 1134 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 TREHO43280 583 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 STAM2O75886 525 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 GNAT1P11488 350 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 UBA1P22314 1058 aaKnown RBP11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 CCND2P30279 289 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 HOXA13P31271 388 aaPredicted RBP11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 ICAM3P32942 547 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 FAM26DQ5JW98 314 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 POTEBQ6S5H4 581 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 MYOCDQ8IZQ8 938 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 DIAPH3Q9NSV4 1193 aa11.43□□□□□ -0.58
TRAFD1-207ENST00000550051 KAT6AQ92794 2004 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 FAM86C2PA6NEL3 165 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 GCOM1H8Y6P7 765 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 NCK2O43639 380 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 POLR2MP0CAP2 368 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 SMIM10L2AP0DMW4 78 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 SMIM10L2BP0DMW5 78 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 ADAM17P78536 824 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 NUCB1Q02818 461 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 GPM6BQ13491 265 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 CHD1LQ86WJ1 897 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 IL31RAQ8NI17 732 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 APBB2Q92870 758 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 PABPC5Q96DU9 382 aaKnown RBP11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 YME1L1Q96TA2 773 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 OSBPL7Q9BZF2 842 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 RWDD1Q9H446 243 aaPredicted RBP11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 BCAS3Q9H6U6 928 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 PRKAG3Q9UGI9 489 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 COL4A6Q14031 1691 aa11.42□□□□□ -0.58
TRAFD1-207ENST00000550051 BAZ2BQ9UIF8 2168 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 RALGAPA2Q2PPJ7 1873 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 NLRC5Q86WI3 1866 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 PNMA6FA0A0J9YX94 578 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 LGALS2P05162 132 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 RB1P06400 928 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 IL9P15248 144 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 MRPS9P82933 396 aaKnown RBP11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 NEDD9Q14511 834 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 SLC35G1Q2M3R5 365 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 GNPTABQ3T906 1256 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 METTL7BQ6UX53 244 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 RPAINQ86UA6 219 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 GPKOWQ92917 476 aaPredicted RBP eCLIP11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 INPP4AQ96PE3 977 aaPredicted RBP11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 GPR20Q99678 358 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 SETD4Q9NVD3 440 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
TRAFD1-207ENST00000550051 FRMPD4Q14CM0 1322 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 C19orf67A6NJJ6 358 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 C5orf67F2Z3F1 127 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 CYTH3O43739 400 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 SORBS3O60504 671 aa11.4□□□□□ -0.58
TRAFD1-207ENST00000550051 SSTR3P32745 418 aaPredicted RBP11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms