RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
RAB5C-205ENST00000550013 PNMA6FA0A0J9YX94 578 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 H3BRB1 525 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 TREHO43280 583 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 HOXC8P31273 242 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 MRPS9P82933 396 aaKnown RBP17.84■□□□□ 0.45
RAB5C-205ENST00000550013 TTC22Q5TAA0 569 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 KHSRPQ92945 711 aaKnown RBP eCLIP17.84■□□□□ 0.45
RAB5C-205ENST00000550013 TUT1Q9H6E5 874 aaKnown RBP17.84■□□□□ 0.45
RAB5C-205ENST00000550013 TELO2Q9Y4R8 837 aa17.84■□□□□ 0.45
RAB5C-205ENST00000550013 FRMPD4Q14CM0 1322 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 AMHP03971 560 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 CTSHP09668 335 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 TROAPQ12815 778 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 TRAF1Q13077 416 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 WTAPQ15007 396 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 PLEKHG4Q58EX7 1191 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 FBXO22Q8NEZ5 403 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 RNPEPQ9H4A4 650 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 UBE2ZQ9H832 354 aaPredicted RBP17.83■□□□□ 0.44
RAB5C-205ENST00000550013 INSL6Q9Y581 213 aa17.83■□□□□ 0.44
RAB5C-205ENST00000550013 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.44
RAB5C-205ENST00000550013 NLRC5Q86WI3 1866 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 ERICH2A1L162 156 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 NOP56O00567 594 aaKnown RBP17.82■□□□□ 0.44
RAB5C-205ENST00000550013 HTRA4P83105 476 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-205ENST00000550013 CYFIP1Q7L576 1253 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 TRIM50Q86XT4 487 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 INPP4AQ96PE3 977 aaPredicted RBP17.82■□□□□ 0.44
RAB5C-205ENST00000550013 CD320Q9NPF0 282 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 KAT6AQ92794 2004 aa17.82■□□□□ 0.44
RAB5C-205ENST00000550013 SPATA31C2B4DYI2 1134 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 E7EWF7 191 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 CHMLP26374 656 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 ICAM3P32942 547 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 PLA2G5P39877 138 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 ANTXR2P58335 489 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 GNPTABQ3T906 1256 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 METTL7BQ6UX53 244 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
RAB5C-205ENST00000550013 SP7Q8TDD2 431 aaPredicted RBP17.81■□□□□ 0.44
RAB5C-205ENST00000550013 SEPT8Q92599 483 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 GPR20Q99678 358 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 LRFN3Q9BTN0 628 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 SETD4Q9NVD3 440 aa17.81■□□□□ 0.44
RAB5C-205ENST00000550013 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.8■□□□□ 0.44
RAB5C-205ENST00000550013 UPP2O95045 317 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 SP4Q02446 784 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 NEDD9Q14511 834 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
RAB5C-205ENST00000550013 CATIPQ7Z7H3 387 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 NCOA7Q8NI08 942 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 USP26Q9BXU7 913 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 MYO7AQ13402 2215 aa17.8■□□□□ 0.44
RAB5C-205ENST00000550013 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.79■□□□□ 0.44
RAB5C-205ENST00000550013 FIBPO43427 364 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 STAM2O75886 525 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 KCNA5P22460 613 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 SART3Q15020 963 aaKnown RBP17.79■□□□□ 0.44
RAB5C-205ENST00000550013 EPC2Q52LR7 807 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 USP17L6PQ6QN14 398 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 IGDCC4Q8TDY8 1250 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 RUFY2Q8WXA3 655 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 FAM122AQ96E09 287 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 MYL10Q9BUA6 226 aa17.79■□□□□ 0.44
RAB5C-205ENST00000550013 SUPT16HQ9Y5B9 1047 aaKnown RBP17.79■□□□□ 0.44
RAB5C-205ENST00000550013 CAND2O75155 1236 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 LEXMQ3ZCV2 418 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 MB21D2Q8IYB1 491 aaPredicted RBP17.78■□□□□ 0.44
RAB5C-205ENST00000550013 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.78■□□□□ 0.44
RAB5C-205ENST00000550013 LMBR1Q8WVP7 490 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 TOP1MTQ969P6 601 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 MRPL38Q96DV4 380 aaKnown RBP17.78■□□□□ 0.44
RAB5C-205ENST00000550013 YME1L1Q96TA2 773 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 C11orf16Q9NQ32 467 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 ATG2AQ2TAZ0 1938 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 RALGAPA2Q2PPJ7 1873 aa17.78■□□□□ 0.44
RAB5C-205ENST00000550013 FAM86C2PA6NEL3 165 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 GNAT1P11488 350 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 ADAM17P78536 824 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 ARHGAP4P98171 946 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 TMEM31Q5JXX7 168 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 PCNX4Q63HM2 1172 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 SMARCC2Q8TAQ2 1214 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 SPZ1Q9BXG8 430 aa17.77■□□□□ 0.44
RAB5C-205ENST00000550013 ZNF215Q9UL58 517 aaPredicted RBP17.77■□□□□ 0.44
RAB5C-205ENST00000550013 COL4A6Q14031 1691 aa17.77■□□□□ 0.43
RAB5C-205ENST00000550013 MEIS2O14770 477 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 SGSM2O43147 1006 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 IL9P15248 144 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 GPM6BQ13491 265 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 FAM26DQ5JW98 314 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 ZNF654Q8IZM8 581 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 CUL5Q93034 780 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 RRP36Q96EU6 259 aaKnown RBP17.76■□□□□ 0.43
RAB5C-205ENST00000550013 SAMD11Q96NU1 681 aa17.76■□□□□ 0.43
RAB5C-205ENST00000550013 IFIH1Q9BYX4 1025 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms