RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 GJD3Q8N144 294 aa23.24■■□□□ 1.31
GATC-202ENST00000548171 DOCK5Q9H7D0 1870 aa23.24■■□□□ 1.31
GATC-202ENST00000548171 MUC6Q6W4X9 2439 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 PALM3A6NDB9 673 aaPredicted RBP23.23■■□□□ 1.31
GATC-202ENST00000548171 GCOM1H8Y6P7 765 aaPredicted RBP23.23■■□□□ 1.31
GATC-202ENST00000548171 POLR2MP0CAP2 368 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 SEC23AQ15436 765 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 PTCRAQ6ISU1 281 aaPredicted RBP23.23■■□□□ 1.31
GATC-202ENST00000548171 B4GALNT3Q6L9W6 998 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 IL31RAQ8NI17 732 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.23■■□□□ 1.31
GATC-202ENST00000548171 MAD2L2Q9UI95 211 aa23.23■■□□□ 1.31
GATC-202ENST00000548171 SORBS3O60504 671 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 SMIM10L2AP0DMW4 78 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 SMIM10L2BP0DMW5 78 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 EPC2Q52LR7 807 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 TOP1MTQ969P6 601 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 YME1L1Q96TA2 773 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 USP26Q9BXU7 913 aa23.22■■□□□ 1.31
GATC-202ENST00000548171 GRXCR2A6NFK2 248 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 PRR33A8MZF0 331 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 NOP56O00567 594 aaKnown RBP23.21■■□□□ 1.31
GATC-202ENST00000548171 STAM2O75886 525 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 LGALS2P05162 132 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 GNAT1P11488 350 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 NEK9Q8TD19 979 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 PIEZO1Q92508 2521 aa23.21■■□□□ 1.31
GATC-202ENST00000548171 FAM86C2PA6NEL3 165 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 H3BNC9 293 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 ALADP13716 330 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 SSTR3P32745 418 aaPredicted RBP23.2■■□□□ 1.3
GATC-202ENST00000548171 NUCB1Q02818 461 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 NEDD9Q14511 834 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 METTL7BQ6UX53 244 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 FCHSD1Q86WN1 690 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 HOMER1Q86YM7 354 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 BANK1Q8NDB2 785 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 APBB2Q92870 758 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 RNPEPQ9H4A4 650 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 RIOX1Q9H6W3 641 aa23.2■■□□□ 1.3
GATC-202ENST00000548171 TREHO43280 583 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 IL9P15248 144 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 ICAM3P32942 547 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 TRDNQ13061 729 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 GRM4Q14833 912 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 GPKOWQ92917 476 aaPredicted RBP eCLIP23.19■■□□□ 1.3
GATC-202ENST00000548171 FAM50BQ9Y247 325 aa23.19■■□□□ 1.3
GATC-202ENST00000548171 FRMPD4Q14CM0 1322 aa23.18■■□□□ 1.3
GATC-202ENST00000548171 PNMA6FA0A0J9YX94 578 aa23.18■■□□□ 1.3
GATC-202ENST00000548171 GPM6BQ13491 265 aa23.18■■□□□ 1.3
GATC-202ENST00000548171 TMEM192Q8IY95 271 aa23.18■■□□□ 1.3
GATC-202ENST00000548171 PABPC5Q96DU9 382 aaKnown RBP23.18■■□□□ 1.3
GATC-202ENST00000548171 INPP4AQ96PE3 977 aaPredicted RBP23.18■■□□□ 1.3
GATC-202ENST00000548171 PIGSQ96S52 555 aa23.18■■□□□ 1.3
GATC-202ENST00000548171 ZNF215Q9UL58 517 aaPredicted RBP23.18■■□□□ 1.3
GATC-202ENST00000548171 LOC101059915A0A1B0GWI6 518 aaPredicted RBP23.17■■□□□ 1.3
GATC-202ENST00000548171 SPATA31C2B4DYI2 1134 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 CTSHP09668 335 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 COL19A1Q14993 1142 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 CYB5R4Q7L1T6 521 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 ZFP91Q96JP5 570 aaPredicted RBP23.17■■□□□ 1.3
GATC-202ENST00000548171 IFIH1Q9BYX4 1025 aaKnown RBP23.17■■□□□ 1.3
GATC-202ENST00000548171 NSUN3Q9H649 340 aaKnown RBP23.17■■□□□ 1.3
GATC-202ENST00000548171 ATG2AQ2TAZ0 1938 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 MYO7AQ13402 2215 aa23.17■■□□□ 1.3
GATC-202ENST00000548171 FIBPO43427 364 aa23.16■■□□□ 1.3
GATC-202ENST00000548171 UPP2O95045 317 aa23.16■■□□□ 1.3
GATC-202ENST00000548171 GPR20Q99678 358 aa23.16■■□□□ 1.3
GATC-202ENST00000548171 SETD4Q9NVD3 440 aa23.16■■□□□ 1.3
GATC-202ENST00000548171 ERICH2A1L162 156 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 NCK2O43639 380 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 MRPS9P82933 396 aaKnown RBP23.15■■□□□ 1.3
GATC-202ENST00000548171 SLC35G1Q2M3R5 365 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 TCEAL5Q5H9L2 206 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 FAM26DQ5JW98 314 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 BCAS3Q9H6U6 928 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 PRKAG3Q9UGI9 489 aa23.15■■□□□ 1.3
GATC-202ENST00000548171 H3BQ06 376 aaPredicted RBP23.14■■□□□ 1.29
GATC-202ENST00000548171 CYFIP1Q7L576 1253 aa23.14■■□□□ 1.29
GATC-202ENST00000548171 IL17RAQ96F46 866 aa23.14■■□□□ 1.29
GATC-202ENST00000548171 RWDD3Q9Y3V2 267 aa23.14■■□□□ 1.29
GATC-202ENST00000548171 RBAK-RBAKDNI3L0D1 243 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 IFIT3O14879 490 aaKnown RBP23.13■■□□□ 1.29
GATC-202ENST00000548171 CYTH3O43739 400 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 RB1P06400 928 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 ADAM17P78536 824 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 TROAPQ12815 778 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 SART3Q15020 963 aaKnown RBP23.13■■□□□ 1.29
GATC-202ENST00000548171 CSPP1Q1MSJ5 1256 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 XRRA1Q6P2D8 792 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 FIBCD1Q8N539 461 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 LMBR1Q8WVP7 490 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 SENP7Q9BQF6 1050 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 OSBPL7Q9BZF2 842 aa23.13■■□□□ 1.29
GATC-202ENST00000548171 U3KPZ7 1027 aaPredicted RBP23.13■■□□□ 1.29
GATC-202ENST00000548171 NRCAMQ92823 1304 aa23.12■■□□□ 1.29
GATC-202ENST00000548171 C5orf67F2Z3F1 127 aa23.12■■□□□ 1.29
GATC-202ENST00000548171 DCXO43602 365 aa23.12■■□□□ 1.29
GATC-202ENST00000548171 IGHDP01880 384 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms