RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-226ENST00000547259 AAK1Q2M2I8 961 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 MUM1L1Q5H9M0 696 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 FBXO16Q8IX29 292 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-226ENST00000547259 DNERQ8NFT8 737 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 CUL5Q93034 780 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 MTG1Q9BT17 334 aaPredicted RBP13.79□□□□□ -0.2
HDAC7-226ENST00000547259 BRMS1Q9HCU9 246 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 PDGFCQ9NRA1 345 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 GRIN2DO15399 1336 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 TRANK1O15050 2925 aa13.79□□□□□ -0.2
HDAC7-226ENST00000547259 LRRC37A2A6NM11 1700 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 NFIBO00712 420 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 MMP1P03956 469 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 SYT1P21579 422 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 GNA11P29992 359 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 ALDH5A1P51649 535 aaPredicted RBP13.78□□□□□ -0.2
HDAC7-226ENST00000547259 PDE4DQ08499 809 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 SAFBQ15424 915 aaKnown RBP eCLIP13.78□□□□□ -0.2
HDAC7-226ENST00000547259 NFRKBQ6P4R8 1299 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 RNF207Q6ZRF8 634 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 MCF2L2Q86YR7 1114 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 USP38Q8NB14 1042 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 RETREG2Q8NC44 543 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 FBXO18Q8NFZ0 1043 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 BICD2Q8TD16 824 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 SCFD2Q8WU76 684 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 CLEC4DQ8WXI8 215 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 PPM1EQ8WY54 764 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 ASB2Q96Q27 587 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 PHF20Q9BVI0 1012 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 ZMYND12Q9H0C1 365 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 GLT8D2Q9H1C3 349 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 TRPV6Q9H1D0 765 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 PSTPIP2Q9H939 334 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 SCN10AQ9Y5Y9 1956 aa13.78□□□□□ -0.2
HDAC7-226ENST00000547259 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.2
HDAC7-226ENST00000547259 ZBBXA8MT70 800 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 KIF28PB7ZC32 967 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-226ENST00000547259 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 CFBP00751 764 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 ATP2A2P16615 1042 aaKnown RBP13.77□□□□□ -0.21
HDAC7-226ENST00000547259 KRT2P35908 639 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 PURAQ00577 322 aaKnown RBP13.77□□□□□ -0.21
HDAC7-226ENST00000547259 GNL2Q13823 731 aaKnown RBP13.77□□□□□ -0.21
HDAC7-226ENST00000547259 UBE2SQ16763 222 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 PPP2R2DQ66LE6 453 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 GALNT17Q6IS24 598 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 BLIDQ8IZY5 108 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 OR6J1Q8NGC5 347 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 PHOSPHO2Q8TCD6 241 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 NKX2-4Q9H2Z4 354 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 RIC8AQ9NPQ8 531 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 CXXC1Q9P0U4 656 aaPredicted RBP13.77□□□□□ -0.21
HDAC7-226ENST00000547259 PCDHA4Q9UN74 947 aa13.77□□□□□ -0.21
HDAC7-226ENST00000547259 OPLAHO14841 1288 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 STX6O43752 255 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 GTPBP6O43824 516 aaPredicted RBP13.76□□□□□ -0.21
HDAC7-226ENST00000547259 PARNO95453 639 aaKnown RBP13.76□□□□□ -0.21
HDAC7-226ENST00000547259 MYL3P08590 195 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 PSMC6P62333 389 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 BFSP2Q13515 415 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 TTLL4Q14679 1199 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 SLC30A10Q6XR72 485 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 DIS3L2Q8IYB7 885 aaKnown RBP13.76□□□□□ -0.21
HDAC7-226ENST00000547259 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
HDAC7-226ENST00000547259 CCDC155Q8N6L0 562 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 DAGLBQ8NCG7 672 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 WNT8AQ9H1J5 351 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 NOD1Q9Y239 953 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 MYH7BA7E2Y1 1941 aa13.76□□□□□ -0.21
HDAC7-226ENST00000547259 PRRC2BQ5JSZ5 2229 aaKnown RBP13.75□□□□□ -0.21
HDAC7-226ENST00000547259 UMODL1Q5DID0 1318 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 TRIP12Q14669 1992 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-226ENST00000547259 A6NJR5 290 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 PIK3CDO00329 1044 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 PDIA4P13667 645 aaKnown RBP13.75□□□□□ -0.21
HDAC7-226ENST00000547259 HOXA13P31271 388 aaPredicted RBP13.75□□□□□ -0.21
HDAC7-226ENST00000547259 FAM47CQ5HY64 1035 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 MCTP1Q6DN14 999 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 USP17L6PQ6QN14 398 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 SAMD3Q8N6K7 520 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 RASGRP4Q8TDF6 673 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 TMEM260Q9NX78 707 aa13.75□□□□□ -0.21
HDAC7-226ENST00000547259 SPDYE3A6NKU9 549 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 MEIS2O14770 477 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 ADAMTS3O15072 1205 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 POU3F3P20264 500 aaPredicted RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 EDNRBP24530 442 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 HSD17B4P51659 736 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 RPS6P62753 249 aaKnown RBP13.74□□□□□ -0.21
HDAC7-226ENST00000547259 GHRHRQ02643 423 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 ADGRE1Q14246 886 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 NPY5RQ15761 445 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 NBPF20Q3BBV1 942 aa13.74□□□□□ -0.21
HDAC7-226ENST00000547259 JAKMIP3Q5VZ66 844 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms