RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 SORBS3O60504 671 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 NEMFO60524 1076 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 FARP2O94887 1054 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 EN2P19622 333 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 ZNF174Q15697 407 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 FOXD4L5Q5VV16 416 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 RNF180Q86T96 592 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 POTEDQ86YR6 584 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 FOXD4L4Q8WXT5 416 aaPredicted RBP26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 UIMC1Q96RL1 719 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 BCAS3Q9H6U6 928 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 KCNMB3Q9NPA1 279 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 TBC1D22BQ9NU19 505 aa26.24■■□□□ 1.79
SMARCD1-203ENST00000547247 FRMPD3Q5JV73 1810 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 MYCNP04198 464 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 NKX3-2P78367 333 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 ITGB3BPQ13352 177 aaPredicted RBP26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 NBR1Q14596 966 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 ETNPPLQ8TBG4 499 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 SPATA33Q96N06 139 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 PCDHB6Q9Y5E3 794 aa26.23■■□□□ 1.79
SMARCD1-203ENST00000547247 TBX3O15119 743 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 MARCH6O60337 910 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 F13A1P00488 732 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 CPT1AP50416 773 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 LRRC41Q15345 812 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 FSCN1Q16658 493 aaKnown RBP26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 BRDTQ58F21 947 aaPredicted RBP26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 SLC5A5Q92911 643 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 FAM20AQ96MK3 541 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 RIT2Q99578 217 aa26.22■■□□□ 1.79
SMARCD1-203ENST00000547247 CTAGE5O15320 804 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 DHX15O43143 795 aaKnown RBP26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 BAG4O95429 457 aaKnown RBP26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 BRD1O95696 1058 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 IRX5P78411 483 aaPredicted RBP26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 GNASQ5JWF2 1037 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 KLHDC9Q8NEP7 349 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 AFG1LQ8WV93 481 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 JPH1Q9HDC5 661 aaPredicted RBP26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 SLC9A2Q9UBY0 812 aa26.21■■□□□ 1.79
SMARCD1-203ENST00000547247 MYADML2A6NDP7 307 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 A6NJR5 290 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 CST5P28325 142 aaPredicted RBP26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 DDIT3P35638 169 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 BEX3Q00994 111 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 CALCRLQ16602 461 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 HSDL1Q3SXM5 330 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 LRCH2Q5VUJ6 765 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 PPTC7Q8NI37 304 aa26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.2■■□□□ 1.79
SMARCD1-203ENST00000547247 DDX39AO00148 427 aaKnown RBP26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 NOP56O00567 594 aaKnown RBP26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 GAS7O60861 476 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 SP4Q02446 784 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 FAM173BQ6P4H8 233 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 SLFN12Q8IYM2 578 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 GJA10Q969M2 543 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 TCEAL9Q9UHQ7 104 aa26.2■■□□□ 1.78
SMARCD1-203ENST00000547247 DOCK5Q9H7D0 1870 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 ZEB2O60315 1214 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 PSMD10O75832 226 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 NUCB2P80303 420 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 ANKLE1Q8NAG6 615 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 PCSK9Q8NBP7 692 aaKnown RBP26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 HAS1Q92839 578 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 IPO9Q96P70 1041 aaKnown RBP26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 TEKT3Q9BXF9 490 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 TMEM60Q9H2L4 133 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 ZDHHC9Q9Y397 364 aa26.19■■□□□ 1.78
SMARCD1-203ENST00000547247 KBTBD13C9JR72 458 aa26.18■■□□□ 1.78
SMARCD1-203ENST00000547247 DNM1LO00429 736 aa26.18■■□□□ 1.78
SMARCD1-203ENST00000547247 MMP3P08254 477 aa26.18■■□□□ 1.78
SMARCD1-203ENST00000547247 MTMR9Q96QG7 549 aa26.18■■□□□ 1.78
SMARCD1-203ENST00000547247 RGS19P49795 217 aa26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 KRT76Q01546 638 aa26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 KCNA10Q16322 511 aa26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 CCSAPQ6IQ19 270 aaPredicted RBP26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 GPR20Q99678 358 aa26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 TSEN34Q9BSV6 310 aaKnown RBP26.17■■□□□ 1.78
SMARCD1-203ENST00000547247 MKI67P46013 3256 aaKnown RBP26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 PPFIA4O75335 1185 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 OR52Z1P0C646 297 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 PTGDRQ13258 359 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 DGKDQ16760 1214 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 SEPT1Q8WYJ6 367 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 LAD1O00515 517 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 KPNA6O60684 536 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 ACTR2P61160 394 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 ZNF746Q6NUN9 644 aaPredicted RBP26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 C4orf32Q8N8J7 132 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 POLR3EQ9NVU0 708 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 PCDHA12Q9UN75 941 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 CEP131Q9UPN4 1083 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 TELO2Q9Y4R8 837 aa26.16■■□□□ 1.78
SMARCD1-203ENST00000547247 ELP1O95163 1332 aa26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 MOXD2PA6NHM9 499 aa26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 BMP15O95972 392 aa26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 CCNE2O96020 404 aa26.15■■□□□ 1.78
SMARCD1-203ENST00000547247 ASGR1P07306 291 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 436.1 ms