RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 PFKFB3Q16875 520 aaPredicted RBP16.13■□□□□ 0.17
HOXC11-202ENST00000546378 HAUS3Q68CZ6 603 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 MMS22LQ6ZRQ5 1243 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 FBXL16Q8N461 479 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CABS1Q96KC9 395 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 TMX4Q9H1E5 349 aaPredicted RBP16.13■□□□□ 0.17
HOXC11-202ENST00000546378 MYMKA6NI61 221 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 DCDC2CA8MYV0 355 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 OPLAHO14841 1288 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CHMP2AO43633 222 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 UPP2O95045 317 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CFAP221Q4G0U5 840 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 KCNK18Q7Z418 384 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 AMOTL1Q8IY63 956 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 KIAA0895Q8NCT3 520 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 TAF1P21675 1872 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CYTH3O43739 400 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 BMP15O95972 392 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CCNE1P24864 410 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 VPS41P49754 854 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 FAM133BQ5BKY9 247 aaKnown RBP16.13■□□□□ 0.17
HOXC11-202ENST00000546378 CCDC121Q6ZUS5 278 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 DAAM2Q86T65 1068 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 ZNF384Q8TF68 577 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 TCP11Q8WWU5 503 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 SH2D3AQ9BRG2 576 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 EFCC1Q9HA90 598 aa16.13■□□□□ 0.17
HOXC11-202ENST00000546378 POLRMTO00411 1230 aaKnown RBP16.12■□□□□ 0.17
HOXC11-202ENST00000546378 RAD51CO43502 376 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 SRGNP10124 158 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 FUT2Q10981 343 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 CALCRLQ16602 461 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 WNK3Q9BYP7 1800 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 FOXO6A8MYZ6 492 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 CLTAP09496 248 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 ITGA4P13612 1032 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 CALML3P27482 149 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 DOK7Q18PE1 504 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 VWA3BQ502W6 1294 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 WDR93Q6P2C0 686 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 DDX12PQ92771 950 aa16.12■□□□□ 0.17
HOXC11-202ENST00000546378 A0A087X0T9 212 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 FAM228BP0C875 321 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 EEF1GP26641 437 aaKnown RBP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 LSP1P33241 339 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 ARHGAP44Q17R89 818 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 RIOK1Q9BRS2 568 aaKnown RBP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 HAUS2Q9NVX0 235 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 GGA1Q9UJY5 639 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 DAPK3O43293 454 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 CALM1P0DP23 149 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 CALM2P0DP24 149 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 CALM3P0DP25 149 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 ERFP50548 548 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 UBXN2AP68543 259 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 NONOQ15233 471 aaKnown RBP eCLIP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 IFT20Q8IY31 132 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 CASKIN2Q8WXE0 1202 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 TRIM51Q9BSJ1 452 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 SH2D4AQ9H788 454 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 PTPN22Q9Y2R2 807 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 MYO5AQ9Y4I1 1855 aaKnown RBP16.11■□□□□ 0.17
HOXC11-202ENST00000546378 BICDL2A1A5D9 508 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 USP17L5A8MUK1 530 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 CHRNA5P30532 468 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 FLT3P36888 993 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 NAA25Q14CX7 972 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 LRRC14Q15048 493 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 SFMBT2Q5VUG0 894 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 KCTD1Q719H9 257 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 RETREG2Q8NC44 543 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 DNAJC7Q99615 494 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 MYO1AQ9UBC5 1043 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 KIAA1024Q9UPX6 916 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 WDR19Q8NEZ3 1342 aa16.11■□□□□ 0.17
HOXC11-202ENST00000546378 ZNF233A6NK53 670 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 SLC37A4O43826 429 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 PEX19P40855 299 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 EPHB4P54760 987 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 ALX1Q15699 326 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 USH1GQ495M9 461 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 PAIP2Q9BPZ3 127 aaKnown RBP16.1■□□□□ 0.17
HOXC11-202ENST00000546378 TMEM47Q9BQJ4 181 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 TLR10Q9BXR5 811 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 IL17RBQ9NRM6 502 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 STK38LQ9Y2H1 464 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 PLSCR1O15162 318 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 LRRN2O75325 713 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 VIMP08670 466 aaKnown RBP16.1■□□□□ 0.17
HOXC11-202ENST00000546378 ZKSCAN8Q15776 578 aaPredicted RBP16.1■□□□□ 0.17
HOXC11-202ENST00000546378 SLC9C1Q4G0N8 1177 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 U2AF1L4Q8WU68 220 aaKnown RBP16.1■□□□□ 0.17
HOXC11-202ENST00000546378 CCT8L2Q96SF2 557 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 STK32BQ9NY57 414 aa16.1■□□□□ 0.17
HOXC11-202ENST00000546378 KRIT1O00522 736 aa16.09■□□□□ 0.17
HOXC11-202ENST00000546378 KLRC4O43908 158 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms