RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 IGDCC3Q8IVU1 814 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 MFSD3Q96ES6 412 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 TOE1Q96GM8 510 aaKnown RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 SIGLEC10Q96LC7 697 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 ORAI3Q9BRQ5 295 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 KCNK12Q9HB15 430 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 CBLCQ9ULV8 474 aa3.41□□□□□ -1.86
YBX3-214ENST00000544501 TNPO3Q9Y5L0 923 aaKnown RBP3.41□□□□□ -1.86
YBX3-214ENST00000544501 TCRBV5S4A2TA0A5A2 114 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 TCAF2A6NFQ2 919 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 SLC27A2O14975 620 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 BUB1BO60566 1050 aaPredicted RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 KRT1P04264 644 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 AMY2AP04746 511 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 COL6A2P12110 1019 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 AMY2BP19961 511 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 CANXP27824 592 aaKnown RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 GJA4P35212 333 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 DNM2P50570 870 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 ARHGAP44Q17R89 818 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 TMEM177Q53S58 311 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 FIGNQ5HY92 759 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 ZNF648Q5T619 568 aaPredicted RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 HHIPL2Q6UWX4 724 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 EP400NLQ6ZTU2 488 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 KCTD1Q719H9 257 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 B3GNT8Q7Z7M8 397 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 ZC3H18Q86VM9 953 aaKnown RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 OSTM1Q86WC4 334 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 KIF18BQ86Y91 864 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 AHI1Q8N157 1196 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 PPM1KQ8N3J5 372 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 IGSF22Q8N9C0 903 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 ARRDC4Q8NCT1 418 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 SH3RF2Q8TEC5 729 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 DDX1Q92499 740 aaKnown RBP3.4□□□□□ -1.87
YBX3-214ENST00000544501 DDX11Q96FC9 970 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 YIPF4Q9BSR8 244 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 SGPP1Q9BX95 441 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 CD320Q9NPF0 282 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 DTLQ9NZJ0 730 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 SAMD15Q9P1V8 674 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 SRPK3Q9UPE1 567 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 MAPRE3Q9UPY8 281 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 FAN1Q9Y2M0 1017 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 COQ6Q9Y2Z9 468 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 IRAK3Q9Y616 596 aa3.4□□□□□ -1.87
YBX3-214ENST00000544501 RFXAPO00287 272 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 MAN2B1O00754 1011 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CLASP2O75122 1294 aaKnown RBP3.39□□□□□ -1.87
YBX3-214ENST00000544501 C1QTNF9P0C862 333 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 JMJD7P0C870 316 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CYP2C8P10632 490 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 ATF2P15336 505 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 FAHP16930 419 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 RAP1GAPP47736 663 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 MECP2P51608 486 aaKnown RBP3.39□□□□□ -1.87
YBX3-214ENST00000544501 EPHB3P54753 998 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 NCKAP1LP55160 1127 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 JAM2P57087 298 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 NKX3-2P78367 333 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 FOXO4P98177 505 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CAP1Q01518 475 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 TUSC3Q13454 348 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 ZNF460Q14592 562 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 C21orf62-AS1Q17RA5 79 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CFAP100Q494V2 611 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 ZNF385BQ569K4 471 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CDCA2Q69YH5 1023 aaPredicted RBP3.39□□□□□ -1.87
YBX3-214ENST00000544501 ATG14Q6ZNE5 492 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 OTOP1Q7RTM1 612 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 DHX37Q8IY37 1157 aaKnown RBP3.39□□□□□ -1.87
YBX3-214ENST00000544501 C2orf69Q8N8R5 385 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CLEC4DQ8WXI8 215 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 WNK4Q96J92 1243 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 BCAS3Q9H6U6 928 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 SMURF1Q9HCE7 757 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 CABP5Q9NP86 173 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 SMG5Q9UPR3 1016 aaKnown RBP3.39□□□□□ -1.87
YBX3-214ENST00000544501 PRKAB1Q9Y478 270 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 ATP23Q9Y6H3 246 aa3.39□□□□□ -1.87
YBX3-214ENST00000544501 A0A087X0B3 334 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 SLC12A8A0AV02 714 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 FAM83GA6ND36 823 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 M0R2C6 588 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CBX4O00257 560 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 GLRX3O76003 335 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 LRG1P02750 347 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 C8AP07357 584 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 C8BP07358 591 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 PTPN1P18031 435 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 KRT15P19012 456 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 NEK4P51957 841 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 HERVK_113P62684 666 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CR1LQ2VPA4 569 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 PAN2Q504Q3 1202 aaKnown RBP3.38□□□□□ -1.87
YBX3-214ENST00000544501 PIK3R6Q5UE93 754 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 TEPPQ6URK8 271 aa3.38□□□□□ -1.87
YBX3-214ENST00000544501 CD300LDQ6UXZ3 194 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms