RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 RNF180Q86T96 592 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 DHX37Q8IY37 1157 aaKnown RBP15.45■□□□□ 0.06
SP140-213ENST00000543928 ARRDC4Q8NCT1 418 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 GIMAP8Q8ND71 665 aaPredicted RBP15.45■□□□□ 0.06
SP140-213ENST00000543928 EMID1Q96A84 441 aaPredicted RBP15.45■□□□□ 0.06
SP140-213ENST00000543928 ZNF577Q9BSK1 485 aa15.45■□□□□ 0.06
SP140-213ENST00000543928 DOCK5Q9H7D0 1870 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 IPO5O00410 1097 aaKnown RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 FARP2O94887 1054 aaPredicted RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 PDIA4P13667 645 aaKnown RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 EN2P19622 333 aaPredicted RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 TOB1P50616 345 aaPredicted RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 NKX3-2P78367 333 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 RESTQ13127 1097 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 ITGB3BPQ13352 177 aaPredicted RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 GNASQ5JWF2 1037 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 TTC38Q5R3I4 469 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 METTL7BQ6UX53 244 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 BRAPQ7Z569 592 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 KLHDC9Q8NEP7 349 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 AFG1LQ8WV93 481 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 SPATA33Q96N06 139 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 SDF4Q9BRK5 362 aa15.44■□□□□ 0.06
SP140-213ENST00000543928 DAXXQ9UER7 740 aaPredicted RBP15.44■□□□□ 0.06
SP140-213ENST00000543928 NFASCO94856 1347 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 DNM1LO00429 736 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 CAPN2P17655 700 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 CST5P28325 142 aaPredicted RBP15.43■□□□□ 0.06
SP140-213ENST00000543928 MCM7P33993 719 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 CPT1AP50416 773 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 SP4Q02446 784 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 PKP1Q13835 747 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 NBR1Q14596 966 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 ZNF174Q15697 407 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 BRDTQ58F21 947 aaPredicted RBP15.43■□□□□ 0.06
SP140-213ENST00000543928 RILPL1Q5EBL4 403 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 SLC5A5Q92911 643 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 GJA10Q969M2 543 aa15.43■□□□□ 0.06
SP140-213ENST00000543928 JPH1Q9HDC5 661 aaPredicted RBP15.43■□□□□ 0.06
SP140-213ENST00000543928 A6NJR5 290 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 KBTBD13C9JR72 458 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 DDX39AO00148 427 aaKnown RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 NOP56O00567 594 aaKnown RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 DHX15O43143 795 aaKnown RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 NEMFO60524 1076 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 MMP3P08254 477 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 ZSCAN22P10073 491 aaPredicted RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 MNX1P50219 401 aaPredicted RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 KCNA10Q16322 511 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 HSDL1Q3SXM5 330 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 FOXD4L5Q5VV16 416 aaPredicted RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 CCSAPQ6IQ19 270 aaPredicted RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 ANKLE1Q8NAG6 615 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 PCSK9Q8NBP7 692 aaKnown RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 PPTC7Q8NI37 304 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 ETNPPLQ8TBG4 499 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 FOXD4L4Q8WXT5 416 aaPredicted RBP15.42■□□□□ 0.06
SP140-213ENST00000543928 KCNMB3Q9NPA1 279 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 TBC1D22BQ9NU19 505 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 SLC9A2Q9UBY0 812 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 TELO2Q9Y4R8 837 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 PCDHB6Q9Y5E3 794 aa15.42■□□□□ 0.06
SP140-213ENST00000543928 TBX3O15119 743 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 ZEB2O60315 1214 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 MARCH6O60337 910 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 GAS7O60861 476 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 ORC2Q13416 577 aaPredicted RBP15.41■□□□□ 0.06
SP140-213ENST00000543928 CALCRLQ16602 461 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 LRCH2Q5VUJ6 765 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 DIS3LQ8TF46 1054 aaKnown RBP15.41■□□□□ 0.06
SP140-213ENST00000543928 HAS1Q92839 578 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 FAM20AQ96MK3 541 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 RIT2Q99578 217 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 GPR20Q99678 358 aa15.41■□□□□ 0.06
SP140-213ENST00000543928 TSEN34Q9BSV6 310 aaKnown RBP15.41■□□□□ 0.06
SP140-213ENST00000543928 ZSCAN16Q9H4T2 348 aaPredicted RBP15.41■□□□□ 0.06
SP140-213ENST00000543928 PSMD10O75832 226 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 F13A1P00488 732 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 ASGR1P07306 291 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 MYL3P08590 195 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 ACLYP53396 1101 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 DGKDQ16760 1214 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 TEKT3Q9BXF9 490 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 TMEM60Q9H2L4 133 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.4■□□□□ 0.06
SP140-213ENST00000543928 POLR3EQ9NVU0 708 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 TCEAL9Q9UHQ7 104 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 PHF24Q9UPV7 400 aa15.4■□□□□ 0.06
SP140-213ENST00000543928 GSTTP1A0A1W2PQM5 241 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 MOXD2PA6NHM9 499 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 KPNA6O60684 536 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 PPFIA4O75335 1185 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 BAG4O95429 457 aaKnown RBP15.39■□□□□ 0.05
SP140-213ENST00000543928 BRD1O95696 1058 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 CCNE2O96020 404 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 HOXD8P13378 290 aaPredicted RBP15.39■□□□□ 0.05
SP140-213ENST00000543928 ACTR2P61160 394 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 KRT76Q01546 638 aa15.39■□□□□ 0.05
SP140-213ENST00000543928 CXCL17Q6UXB2 119 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms