RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 H3BRB1 525 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 NOP56O00567 594 aaKnown RBP22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 MEIS2O14770 477 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 FIBPO43427 364 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 GTPBP6O43824 516 aaPredicted RBP22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 STAM2O75886 525 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 SMIM10L2AP0DMW4 78 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 SMIM10L2BP0DMW5 78 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 RXRAP19793 462 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 TRIM50Q86XT4 487 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 ADAMTS19Q8TE59 1207 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 MTA3Q9BTC8 594 aa22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 TUT1Q9H6E5 874 aaKnown RBP22.65■■□□□ 1.22
CACNA1C-230ENST00000543114 C17orf102A2RUQ5 167 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 TNFRSF10AO00220 468 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 SLC27A2O14975 620 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 THPOP40225 353 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 TFF2Q03403 129 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 NEDD9Q14511 834 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 CYFIP1Q7L576 1253 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 CMTR1Q8N1G2 835 aaKnown RBP22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 SRBD1Q8N5C6 995 aaKnown RBP22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 SMARCC2Q8TAQ2 1214 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 ATP6V0A1Q93050 837 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 GPR20Q99678 358 aa22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 TSPYL2Q9H2G4 693 aaPredicted RBP22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 SEC63Q9UGP8 760 aaKnown RBP22.64■■□□□ 1.21
CACNA1C-230ENST00000543114 PIK3CDO00329 1044 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 LPXNO60711 386 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 LGR5O75473 907 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 GJB5O95377 273 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 SMARCA1P28370 1054 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 MCM5P33992 734 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 GRB10Q13322 594 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 SKIV2LQ15477 1246 aaKnown RBP22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 PCNX4Q63HM2 1172 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 NFXL1Q6ZNB6 911 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 RAB11FIP4Q86YS3 637 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 TMEM87BQ96K49 555 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 ESYT1Q9BSJ8 1104 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 ZBED2Q9BTP6 218 aa22.63■■□□□ 1.21
CACNA1C-230ENST00000543114 EMSYQ7Z589 1322 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 CCDC69A6NI79 296 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 TREHO43280 583 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 EFCAB14O75071 495 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 SP4Q02446 784 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 MKRN4PQ13434 485 aaPredicted RBP22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 IKBKEQ14164 716 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 GDPD5Q8WTR4 605 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 CUL5Q93034 780 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 LZTS2Q9BRK4 669 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 RNPEPQ9H4A4 650 aa22.62■■□□□ 1.21
CACNA1C-230ENST00000543114 RSPH10B2B2RC85 870 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 RSPH10BP0C881 870 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 CREB3L3Q68CJ9 461 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 FAM117BQ6P1L5 589 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 DBF4BQ8NFT6 615 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 KAT6AQ92794 2004 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 UHRF1Q96T88 793 aaPredicted RBP22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 USP26Q9BXU7 913 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 LRRC2Q9BYS8 371 aa22.61■■□□□ 1.21
CACNA1C-230ENST00000543114 BRWD1Q9NSI6 2320 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 hCG_1642624A0A1W2PR95 340 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 CTSHP09668 335 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 LIFRP42702 1097 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 GNAQP50148 359 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 XRRA1Q6P2D8 792 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 LIN28BQ6ZN17 250 aaKnown RBP eCLIP22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 IL27Q8NEV9 243 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 RAD9AQ99638 391 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 OSBPL7Q9BZF2 842 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 ANO2Q9NQ90 1003 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 SETD4Q9NVD3 440 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 MTUS1Q9ULD2 1270 aa22.6■■□□□ 1.21
CACNA1C-230ENST00000543114 LINC01553A4QN01 128 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 KCNQ1P51787 676 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 NECTIN1Q15223 517 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 PLEKHG4Q58EX7 1191 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 TMTC2Q8N394 836 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 NECAB3Q96P71 396 aaPredicted RBP22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 SENP7Q9BQF6 1050 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 ZNF215Q9UL58 517 aaPredicted RBP22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 BDP1A6H8Y1 2624 aa22.59■■□□□ 1.21
CACNA1C-230ENST00000543114 CALM1P0DP23 149 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 CALM2P0DP24 149 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 CALM3P0DP25 149 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 UBE2SQ16763 222 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 UTP14CQ5TAP6 766 aaKnown RBP22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 TMTC3Q6ZXV5 915 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 NLRX1Q86UT6 975 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 SKAP1Q86WV1 359 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 MICU3Q86XE3 530 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 PSTPIP2Q9H939 334 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 SLC12A7Q9Y666 1083 aa22.58■■□□□ 1.21
CACNA1C-230ENST00000543114 CAND2O75155 1236 aa22.57■■□□□ 1.2
CACNA1C-230ENST00000543114 BMP1P13497 986 aa22.57■■□□□ 1.2
CACNA1C-230ENST00000543114 KCNA2P16389 499 aa22.57■■□□□ 1.2
CACNA1C-230ENST00000543114 ADAM17P78536 824 aa22.57■■□□□ 1.2
CACNA1C-230ENST00000543114 MYOCDQ8IZQ8 938 aa22.57■■□□□ 1.2
CACNA1C-230ENST00000543114 CCDC82Q8N4S0 544 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms