RNA–Protein interactions for RNA: ENST00000542947.1

SLC6A13-210, Transcript of solute carrier family 6 member 13, humanhuman

TSL 3

Gene SLC6A13, Length 490 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A13-210ENST00000542947 LRCH2Q5VUJ6 765 aa20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 ATL3Q6DD88 541 aa20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 FAM173BQ6P4H8 233 aa20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 OR6J1Q8NGC5 347 aa20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 JPH1Q9HDC5 661 aaPredicted RBP20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 DOCK5Q9H7D0 1870 aa20.88■□□□□ 0.93
SLC6A13-210ENST00000542947 SYNRGQ9UMZ2 1314 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 DYNC1LI2O43237 492 aaPredicted RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 GAS7O60861 476 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 FARP2O94887 1054 aaPredicted RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 GJB1P08034 283 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 OR52Z1P0C646 297 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 CAPN2P17655 700 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 GJA9P57773 515 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 ARHGAP1Q07960 439 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 BRDTQ58F21 947 aaPredicted RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 TMEM63BQ5T3F8 832 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 GJC2Q5T442 439 aaPredicted RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 ANO1Q5XXA6 986 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 LHX8Q68G74 356 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 CYFIP1Q7L576 1253 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 COPS5Q92905 334 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 LENG1Q96BZ8 264 aaPredicted RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 DEFB118Q96PH6 123 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 TMEM106CQ9BVX2 250 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 TEKT3Q9BXF9 490 aa20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 UPF3AQ9H1J1 476 aaKnown RBP20.87■□□□□ 0.93
SLC6A13-210ENST00000542947 NOP56O00567 594 aaKnown RBP20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 CPT1AP50416 773 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 NKX3-2P78367 333 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 KRT76Q01546 638 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 PTGDRQ13258 359 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 SF3A1Q15459 793 aaKnown RBP20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 PPTC7Q8NI37 304 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 HAS1Q92839 578 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 SPATA33Q96N06 139 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 MTMR9Q96QG7 549 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 POLR3EQ9NVU0 708 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 SLC9A2Q9UBY0 812 aa20.86■□□□□ 0.93
SLC6A13-210ENST00000542947 DHX15O43143 795 aaKnown RBP20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 PSMD10O75832 226 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 C6orf222P0C671 652 aaPredicted RBP20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 PRPHP41219 470 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 ATP2C1P98194 919 aaPredicted RBP20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 RNF180Q86T96 592 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 ARRDC4Q8NCT1 418 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 USP28Q96RU2 1077 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 TMEM60Q9H2L4 133 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 CFAP45Q9UL16 551 aa20.85■□□□□ 0.93
SLC6A13-210ENST00000542947 ZEB2O60315 1214 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 ADAMTS4O75173 837 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 SGPL1O95470 568 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 CST5P28325 142 aaPredicted RBP20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 FSCN1Q16658 493 aaKnown RBP20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 ZNF746Q6NUN9 644 aaPredicted RBP20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 SMAP1Q8IYB5 467 aaPredicted RBP20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 C4orf32Q8N8J7 132 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 U2AF1L4Q8WU68 220 aaKnown RBP20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 UIMC1Q96RL1 719 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 OGDHLQ9ULD0 1010 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 PCDHA12Q9UN75 941 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 CLIC4Q9Y696 253 aa20.84■□□□□ 0.93
SLC6A13-210ENST00000542947 ELP1O95163 1332 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 A6NJR5 290 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 DDX39AO00148 427 aaKnown RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 SORBS3O60504 671 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 PGK1P00558 417 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 SFNP31947 248 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 TXKP42681 527 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 GJA8P48165 433 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 NASPP49321 788 aaPredicted RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 KRT85P78386 507 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 TMEM266Q2M3C6 531 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 FOXD4L6Q3SYB3 417 aaPredicted RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 ARL6IP4Q66PJ3 421 aaKnown RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 FOXD4L3Q6VB84 417 aaPredicted RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 AFG1LQ8WV93 481 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 CRISPLD2Q9H0B8 497 aa20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 TTC12Q9H892 705 aaPredicted RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 MORC2Q9Y6X9 1032 aaPredicted RBP20.83■□□□□ 0.93
SLC6A13-210ENST00000542947 YEATS4O95619 227 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 MMP3P08254 477 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 PTGS1P23219 599 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 JAK3P52333 1124 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 ACTR2P61160 394 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 SP4Q02446 784 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 CEBPZQ03701 1054 aaKnown RBP20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 DNM1Q05193 864 aaKnown RBP20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 PPP2R5CQ13362 524 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 HSDL1Q3SXM5 330 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 GNASQ5JWF2 1037 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 DTHD1Q6ZMT9 781 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 PCSK9Q8NBP7 692 aaKnown RBP20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 RDM1Q8NG50 284 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 SEPT1Q8WYJ6 367 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 GJA10Q969M2 543 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 GPR20Q99678 358 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 RAB34Q9BZG1 259 aa20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 FTOQ9C0B1 505 aaKnown RBP eCLIP20.82■□□□□ 0.92
SLC6A13-210ENST00000542947 BCAS3Q9H6U6 928 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms