RNA–Protein interactions for RNA: ENST00000542848.5

PTPN6-219, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 656 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-219ENST00000542848 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
PTPN6-219ENST00000542848 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PTPN6-219ENST00000542848 HLA-CQ95604 372 aa13.71□□□□□ -0.21
PTPN6-219ENST00000542848 TGS1Q96RS0 853 aaKnown RBP13.71□□□□□ -0.21
PTPN6-219ENST00000542848 MAP3K14Q99558 947 aa13.71□□□□□ -0.21
PTPN6-219ENST00000542848 USP26Q9BXU7 913 aa13.71□□□□□ -0.21
PTPN6-219ENST00000542848 TUT1Q9H6E5 874 aaKnown RBP13.71□□□□□ -0.21
PTPN6-219ENST00000542848 SPATA31C2B4DYI2 1134 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 SGSM2O43147 1006 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 COL9A1P20849 921 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 SMARCA1P28370 1054 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 THPOP40225 353 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 KCNQ1P51787 676 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 MRPS9P82933 396 aaKnown RBP13.7□□□□□ -0.22
PTPN6-219ENST00000542848 MAP4K1Q92918 833 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 ATP6V0A1Q93050 837 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 ZFP91Q96JP5 570 aaPredicted RBP13.7□□□□□ -0.22
PTPN6-219ENST00000542848 INPP4AQ96PE3 977 aaPredicted RBP13.7□□□□□ -0.22
PTPN6-219ENST00000542848 INSL6Q9Y581 213 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
PTPN6-219ENST00000542848 LINC01553A4QN01 128 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
PTPN6-219ENST00000542848 CAND2O75155 1236 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 AMHP03971 560 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 LGALS2P05162 132 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 GNAT1P11488 350 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 ANTXR2P58335 489 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 MKRN4PQ13434 485 aaPredicted RBP13.69□□□□□ -0.22
PTPN6-219ENST00000542848 PLEKHG4Q58EX7 1191 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 XRRA1Q6P2D8 792 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 METTL7BQ6UX53 244 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 SPRED2Q7Z698 418 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
PTPN6-219ENST00000542848 DBF4BQ8NFT6 615 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 SPZ1Q9BXG8 430 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 RNPEPQ9H4A4 650 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 BCAS3Q9H6U6 928 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 SUGCTQ9HAC7 445 aa13.69□□□□□ -0.22
PTPN6-219ENST00000542848 MYO7AQ13402 2215 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 PIK3CDO00329 1044 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 TREHO43280 583 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 FIBPO43427 364 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 KIF5BP33176 963 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTPN6-219ENST00000542848 CYFIP1Q7L576 1253 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 TMTC2Q8N394 836 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
PTPN6-219ENST00000542848 SMARCC2Q8TAQ2 1214 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 CUL5Q93034 780 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 RRP36Q96EU6 259 aaKnown RBP13.68□□□□□ -0.22
PTPN6-219ENST00000542848 NECAB3Q96P71 396 aaPredicted RBP13.68□□□□□ -0.22
PTPN6-219ENST00000542848 GPR20Q99678 358 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 LZTS2Q9BRK4 669 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 RTEL1Q9NZ71 1219 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 TTC3P53804 2025 aa13.68□□□□□ -0.22
PTPN6-219ENST00000542848 ATG2AQ2TAZ0 1938 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 DDAH1O94760 285 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 GNAQP50148 359 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 SEMA3FQ13275 785 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 FAM117BQ6P1L5 589 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 ZNF654Q8IZM8 581 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 GIMAP8Q8ND71 665 aaPredicted RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 SP7Q8TDD2 431 aaPredicted RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 GDPD5Q8WTR4 605 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 PIBF1Q8WXW3 757 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 SEPT8Q92599 483 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 LY9Q9HBG7 655 aa13.67□□□□□ -0.22
PTPN6-219ENST00000542848 ZNF215Q9UL58 517 aaPredicted RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 RBM8AQ9Y5S9 174 aaKnown RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 MYH9P35579 1960 aaKnown RBP13.67□□□□□ -0.22
PTPN6-219ENST00000542848 EVPLQ92817 2033 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 MEIS2O14770 477 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 USP17L6PQ6QN14 398 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 CASC1Q6TDU7 716 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 NLRX1Q86UT6 975 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 MYOCDQ8IZQ8 938 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 C1QTNF1Q9BXJ1 281 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 SETD4Q9NVD3 440 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 SEC63Q9UGP8 760 aaKnown RBP13.66□□□□□ -0.22
PTPN6-219ENST00000542848 MTUS1Q9ULD2 1270 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 WDR81Q562E7 1941 aa13.66□□□□□ -0.22
PTPN6-219ENST00000542848 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.65□□□□□ -0.22
PTPN6-219ENST00000542848 MCM5P33992 734 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 ADAM17P78536 824 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 FAM26DQ5JW98 314 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 FBXO22Q8NEZ5 403 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 APBB2Q92870 758 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 TOP1MTQ969P6 601 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 TMEM87BQ96K49 555 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 SAMD11Q96NU1 681 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 COL4A6Q14031 1691 aa13.65□□□□□ -0.22
PTPN6-219ENST00000542848 NRCAMQ92823 1304 aa13.64□□□□□ -0.23
PTPN6-219ENST00000542848 PRC1O43663 620 aa13.64□□□□□ -0.23
PTPN6-219ENST00000542848 CALM1P0DP23 149 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms