RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 ADCY7P51828 1080 aa20■□□□□ 0.79
LTBR-210ENST00000542830 RBL2Q08999 1139 aa20■□□□□ 0.79
LTBR-210ENST00000542830 PTK7Q13308 1070 aa20■□□□□ 0.79
LTBR-210ENST00000542830 DEFB128Q7Z7B8 93 aa20■□□□□ 0.79
LTBR-210ENST00000542830 TIFAQ96CG3 184 aa20■□□□□ 0.79
LTBR-210ENST00000542830 GPR20Q99678 358 aa20■□□□□ 0.79
LTBR-210ENST00000542830 TUT1Q9H6E5 874 aaKnown RBP20■□□□□ 0.79
LTBR-210ENST00000542830 SMCO2A6NFE2 343 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 MTMR1Q13613 665 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 PFKFB3Q16875 520 aaPredicted RBP19.99■□□□□ 0.79
LTBR-210ENST00000542830 TYW1BQ6NUM6 668 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 VWCEQ96DN2 955 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 CTAGE1Q96RT6 745 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 TTYH1Q9H313 450 aaPredicted RBP19.99■□□□□ 0.79
LTBR-210ENST00000542830 CXXC1Q9P0U4 656 aaPredicted RBP19.99■□□□□ 0.79
LTBR-210ENST00000542830 UBIAD1Q9Y5Z9 338 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 SLC4A7Q9Y6M7 1214 aa19.99■□□□□ 0.79
LTBR-210ENST00000542830 SELPP16109 830 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 ITGB5P18084 799 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 AP3B2Q13367 1082 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 RAB30Q15771 203 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 RUFY3Q7L099 469 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 CCDC12Q8WUD4 166 aaPredicted RBP19.98■□□□□ 0.79
LTBR-210ENST00000542830 PBX4Q9BYU1 374 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 BCAS3Q9H6U6 928 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 ZSWIM6Q9HCJ5 1215 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 JADE2Q9NQC1 790 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 MSRAQ9UJ68 235 aa19.98■□□□□ 0.79
LTBR-210ENST00000542830 ZNF215Q9UL58 517 aaPredicted RBP19.98■□□□□ 0.79
LTBR-210ENST00000542830 TANC1Q9C0D5 1861 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 ZBBXA8MT70 800 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 SCG2P13521 617 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 KCNA2P16389 499 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 EVCP57679 992 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 AKAP17AQ02040 695 aaKnown RBP19.97■□□□□ 0.79
LTBR-210ENST00000542830 LRRC8DQ7L1W4 858 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 DHX38Q92620 1227 aaKnown RBP19.97■□□□□ 0.79
LTBR-210ENST00000542830 CDX2Q99626 313 aaPredicted RBP19.97■□□□□ 0.79
LTBR-210ENST00000542830 TM6SF1Q9BZW5 370 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 FTOQ9C0B1 505 aaKnown RBP eCLIP19.97■□□□□ 0.79
LTBR-210ENST00000542830 CYP46A1Q9Y6A2 500 aa19.97■□□□□ 0.79
LTBR-210ENST00000542830 TRIP12Q14669 1992 aaPredicted RBP19.96■□□□□ 0.79
LTBR-210ENST00000542830 ESYT2A0FGR8 921 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 C17orf102A2RUQ5 167 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 GRXCR1A8MXD5 290 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 PRPF3O43395 683 aaKnown RBP19.96■□□□□ 0.79
LTBR-210ENST00000542830 CKBP12277 381 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 ANO3Q9BYT9 981 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 ZNF576Q9H609 170 aa19.96■□□□□ 0.79
LTBR-210ENST00000542830 ATP9AO75110 1047 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 SMIM10L2AP0DMW4 78 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 SMIM10L2BP0DMW5 78 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 GNAT1P11488 350 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 HOXC8P31273 242 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 CLK2P49760 499 aaKnown RBP19.95■□□□□ 0.78
LTBR-210ENST00000542830 SP4Q02446 784 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 MCTP2Q6DN12 878 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 SEPT1Q8WYJ6 367 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 ATP6V0A1Q93050 837 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 MXRA8Q9BRK3 442 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 SCN5AQ14524 2016 aa19.95■□□□□ 0.78
LTBR-210ENST00000542830 BAIAP3O94812 1187 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 ATP2A2P16615 1042 aaKnown RBP19.94■□□□□ 0.78
LTBR-210ENST00000542830 PDIA3P30101 505 aaKnown RBP19.94■□□□□ 0.78
LTBR-210ENST00000542830 SREBF1P36956 1147 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 PBX2P40425 430 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 ZNF200P98182 395 aaPredicted RBP19.94■□□□□ 0.78
LTBR-210ENST00000542830 CEP55Q53EZ4 464 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 UTP14CQ5TAP6 766 aaKnown RBP19.94■□□□□ 0.78
LTBR-210ENST00000542830 SERINC5Q86VE9 423 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 PHOSPHO2Q8TCD6 241 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 SLC9A7Q96T83 725 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 RNF26Q9BY78 433 aaPredicted RBP19.94■□□□□ 0.78
LTBR-210ENST00000542830 ZMYND12Q9H0C1 365 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 C6orf50Q9HD87 102 aa19.94■□□□□ 0.78
LTBR-210ENST00000542830 COL6A3P12111 3177 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 IFNAR1P17181 557 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 GNA11P29992 359 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 TCF7P36402 384 aaPredicted RBP19.93■□□□□ 0.78
LTBR-210ENST00000542830 TOB2Q14106 344 aaPredicted RBP19.93■□□□□ 0.78
LTBR-210ENST00000542830 HIC1Q14526 733 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 NTRK3Q16288 839 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 PKN1Q16512 942 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 TRIM71Q2Q1W2 868 aaKnown RBP19.93■□□□□ 0.78
LTBR-210ENST00000542830 TRIM50Q86XT4 487 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 SLC17A8Q8NDX2 589 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 PGBD1Q96JS3 809 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 RNPEPQ9H4A4 650 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 KCNH7Q9NS40 1196 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 PCDHA11Q9Y5I1 949 aa19.93■□□□□ 0.78
LTBR-210ENST00000542830 DOCK5Q9H7D0 1870 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 EIF5BO60841 1220 aaKnown RBP19.92■□□□□ 0.78
LTBR-210ENST00000542830 CAND2O75155 1236 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 CXCL10P02778 98 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 FOSL2P15408 326 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 ZNF76P36508 570 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 CCT2P78371 535 aaKnown RBP19.92■□□□□ 0.78
LTBR-210ENST00000542830 CNKSR3Q6P9H4 555 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 NIPA1Q7RTP0 329 aa19.92■□□□□ 0.78
LTBR-210ENST00000542830 CCDC148Q8NFR7 591 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms