RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 SMIM10L2AP0DMW4 78 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 SMIM10L2BP0DMW5 78 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 GNAT1P11488 350 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 KCNA5P22460 613 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 HTRA4P83105 476 aaPredicted RBP17.86■□□□□ 0.45
RTN3-211ENST00000542238 GRM4Q14833 912 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 LEXMQ3ZCV2 418 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 CYB5R4Q7L1T6 521 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 GPKOWQ92917 476 aaPredicted RBP eCLIP17.86■□□□□ 0.45
RTN3-211ENST00000542238 ZFP91Q96JP5 570 aaPredicted RBP17.86■□□□□ 0.45
RTN3-211ENST00000542238 RIOX1Q9H6W3 641 aa17.86■□□□□ 0.45
RTN3-211ENST00000542238 PNMA6FA0A0J9YX94 578 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 IFIT3O14879 490 aaKnown RBP17.85■□□□□ 0.45
RTN3-211ENST00000542238 TREHO43280 583 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 STAM2O75886 525 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 IGHDP01880 384 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 NEDD9Q14511 834 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 NLRC5Q86WI3 1866 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 SP7Q8TDD2 431 aaPredicted RBP17.85■□□□□ 0.45
RTN3-211ENST00000542238 MRPL38Q96DV4 380 aaKnown RBP17.85■□□□□ 0.45
RTN3-211ENST00000542238 YME1L1Q96TA2 773 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 RNPEPQ9H4A4 650 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 DOCK5Q9H7D0 1870 aa17.85■□□□□ 0.45
RTN3-211ENST00000542238 PI4K2BG5E9Z4 385 aa17.84■□□□□ 0.45
RTN3-211ENST00000542238 HOXC8P31273 242 aa17.84■□□□□ 0.45
RTN3-211ENST00000542238 MKRN4PQ13434 485 aaPredicted RBP17.84■□□□□ 0.45
RTN3-211ENST00000542238 SART3Q15020 963 aaKnown RBP17.84■□□□□ 0.45
RTN3-211ENST00000542238 EPC2Q52LR7 807 aa17.84■□□□□ 0.45
RTN3-211ENST00000542238 KHSRPQ92945 711 aaKnown RBP eCLIP17.84■□□□□ 0.452e-6■■□□□ 11.6
RTN3-211ENST00000542238 TOP1MTQ969P6 601 aa17.84■□□□□ 0.45
RTN3-211ENST00000542238 U3KPZ7 1027 aaPredicted RBP17.84■□□□□ 0.45
RTN3-211ENST00000542238 UPP2O95045 317 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 CTSHP09668 335 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 SSTR3P32745 418 aaPredicted RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 ICAM3P32942 547 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 WTAPQ15007 396 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 PUS10Q3MIT2 529 aaKnown RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 TIGD5Q53EQ6 642 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 PTCRAQ6ISU1 281 aaPredicted RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 METTL7BQ6UX53 244 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 CYFIP1Q7L576 1253 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 RALYLQ86SE5 291 aaKnown RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 FAM178BQ8IXR5 827 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 GJD3Q8N144 294 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 APBB2Q92870 758 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 INPP4AQ96PE3 977 aaPredicted RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 CD320Q9NPF0 282 aa17.83■□□□□ 0.44
RTN3-211ENST00000542238 ZNF215Q9UL58 517 aaPredicted RBP17.83■□□□□ 0.44
RTN3-211ENST00000542238 RALGAPA2Q2PPJ7 1873 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 SPATA31C2B4DYI2 1134 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 H3BNC9 293 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 FIBPO43427 364 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 MRPS9P82933 396 aaKnown RBP17.82■□□□□ 0.44
RTN3-211ENST00000542238 GPM6BQ13491 265 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 SLC35G1Q2M3R5 365 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 RUFY2Q8WXA3 655 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 IFIH1Q9BYX4 1025 aaKnown RBP17.82■□□□□ 0.44
RTN3-211ENST00000542238 BCAS3Q9H6U6 928 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 RTEL1Q9NZ71 1219 aa17.82■□□□□ 0.44
RTN3-211ENST00000542238 FRMPD4Q14CM0 1322 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 FAM86C2PA6NEL3 165 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 CYTH3O43739 400 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 CATIPQ7Z7H3 387 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 TMEM192Q8IY95 271 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 BANK1Q8NDB2 785 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 NCOA7Q8NI08 942 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 SMARCC2Q8TAQ2 1214 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 CUL5Q93034 780 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 GPR20Q99678 358 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 IL25Q9H293 177 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 C11orf16Q9NQ32 467 aa17.81■□□□□ 0.44
RTN3-211ENST00000542238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.8■□□□□ 0.44
RTN3-211ENST00000542238 RBAK-RBAKDNI3L0D1 243 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 CYP21A2P08686 494 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 IL9P15248 144 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 HOXD11P31277 338 aaPredicted RBP17.8■□□□□ 0.44
RTN3-211ENST00000542238 ARHGAP4P98171 946 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 TROAPQ12815 778 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
RTN3-211ENST00000542238 XRRA1Q6P2D8 792 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 EP400NLQ6ZTU2 488 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 GIMAP8Q8ND71 665 aaPredicted RBP17.8■□□□□ 0.44
RTN3-211ENST00000542238 PIBF1Q8WXW3 757 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 SENP7Q9BQF6 1050 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 FAM50BQ9Y247 325 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 COL4A6Q14031 1691 aa17.8■□□□□ 0.44
RTN3-211ENST00000542238 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 GRXCR2A6NFK2 248 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 ALADP13716 330 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 SP4Q02446 784 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 FAM26DQ5JW98 314 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 NLRX1Q86UT6 975 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 TRIM50Q86XT4 487 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 FIBCD1Q8N539 461 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 NEK9Q8TD19 979 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 IL17RAQ96F46 866 aa17.79■□□□□ 0.44
RTN3-211ENST00000542238 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
RTN3-211ENST00000542238 SENP2Q9HC62 589 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms