RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 KLHDC7AQ5VTJ3 777 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L6PQ6QN14 398 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 DDX42Q86XP3 938 aaKnown RBP eCLIP16.89■□□□□ 0.29
CNOT9-208ENST00000542068 PURBQ96QR8 312 aaKnown RBP16.89■□□□□ 0.29
CNOT9-208ENST00000542068 TIAM2Q8IVF5 1701 aa16.89■□□□□ 0.29
CNOT9-208ENST00000542068 PALM3A6NDB9 673 aaPredicted RBP16.88■□□□□ 0.29
CNOT9-208ENST00000542068 SLC37A4O43826 429 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 KIAA0754O94854 1291 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 MAN2A1Q16706 1144 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 SHROOM1Q2M3G4 852 aaPredicted RBP16.88■□□□□ 0.29
CNOT9-208ENST00000542068 CFAP221Q4G0U5 840 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 KRT79Q5XKE5 535 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 SEPT12Q8IYM1 358 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 TBC1D16Q8TBP0 767 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.88■□□□□ 0.29
CNOT9-208ENST00000542068 NPHP3-ACAD11A0A0J9YXS1 232 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 EPS15P42566 896 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 GRB10Q13322 594 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 VPS72Q15906 364 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 KIAA0753Q2KHM9 967 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 FAM133AQ8N9E0 248 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 DDX12PQ92771 950 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 GRIN2DO15399 1336 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 KLRC1P26715 233 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 IRX3P78415 501 aaPredicted RBP16.88■□□□□ 0.29
CNOT9-208ENST00000542068 CEP85LQ5SZL2 805 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 LARP4BQ92615 738 aaKnown RBP16.88■□□□□ 0.29
CNOT9-208ENST00000542068 C7orf25Q9BPX7 421 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 AP1M1Q9BXS5 423 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 PCDHAC2Q9Y5I4 1007 aa16.88■□□□□ 0.29
CNOT9-208ENST00000542068 ATP2B4P23634 1241 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 FGFBP2Q9BYJ0 223 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 M0R2N6 131 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 PLCG2P16885 1265 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 IFT20Q8IY31 132 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 NEDD1Q8NHV4 660 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 BLOC1S4Q9NUP1 217 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 COL14A1Q05707 1796 aaKnown RBP16.87■□□□□ 0.29
CNOT9-208ENST00000542068 USP17L10C9JJH3 530 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 KCNK3O14649 394 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 RC3H1Q5TC82 1133 aaKnown RBP16.87■□□□□ 0.29
CNOT9-208ENST00000542068 SLF2Q8IX21 1173 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 SPICE1Q8N0Z3 855 aa16.87■□□□□ 0.29
CNOT9-208ENST00000542068 ABCA3Q99758 1704 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 TMCO5BA8MYB1 307 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 SFMBT2Q5VUG0 894 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 PDXDC1Q6P996 788 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 SH3GLB2Q9NR46 395 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 ZNF233A6NK53 670 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 PDHBP11177 359 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 GYS1P13807 737 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 NFIAQ12857 509 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 SLC9C1Q4G0N8 1177 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 ODF2Q5BJF6 829 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 CENPPQ6IPU0 288 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 CCDC84Q86UT8 332 aaPredicted RBP16.86■□□□□ 0.29
CNOT9-208ENST00000542068 CASKIN2Q8WXE0 1202 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 PNMA5Q96PV4 448 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 TSG101Q99816 390 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 TRIM31Q9BZY9 425 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 DDX4Q9NQI0 724 aaKnown RBP16.86■□□□□ 0.29
CNOT9-208ENST00000542068 SERPINB13Q9UIV8 391 aa16.86■□□□□ 0.29
CNOT9-208ENST00000542068 E7EVH7 732 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 SHOX2O60902 331 aaPredicted RBP16.85■□□□□ 0.29
CNOT9-208ENST00000542068 GDF11O95390 407 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 ACTN1P12814 892 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 FAM83BQ5T0W9 1011 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 BAP1Q92560 729 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 MEIS1O00470 390 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 CEP104O60308 925 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 KCNMA1Q12791 1236 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 IFT88Q13099 833 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 EMBQ6PCB8 327 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 C16orf86Q6ZW13 317 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 ZMYND12Q9H0C1 365 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 A0A087X0T9 212 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 MYL1P05976 194 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 FAM228BP0C875 321 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 KLHL30Q0D2K2 578 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 SLC30A10Q6XR72 485 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 MMS22LQ6ZRQ5 1243 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 ADAT2Q7Z6V5 191 aaKnown RBP16.85■□□□□ 0.29
CNOT9-208ENST00000542068 RAB34Q9BZG1 259 aa16.85■□□□□ 0.29
CNOT9-208ENST00000542068 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 A0A1W2PQJ5 194 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 RAD51CO43502 376 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 HNRNPH1P31943 449 aaKnown RBP16.84■□□□□ 0.29
CNOT9-208ENST00000542068 TAF4BQ92750 862 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 LOC102724159A0A0B4J2E5 919 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 TLR2O60603 784 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 NR1D1P20393 614 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 STAT3P40763 770 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 CYP4A11Q02928 519 aa16.84■□□□□ 0.29
CNOT9-208ENST00000542068 PWP2Q15269 919 aaKnown RBP16.84■□□□□ 0.29
CNOT9-208ENST00000542068 ZYXQ15942 572 aaKnown RBP16.84■□□□□ 0.29
CNOT9-208ENST00000542068 ECM1Q16610 540 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms