RNA–Protein interactions for RNA: ENST00000541922.1

C2CD3-216, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 5

Gene C2CD3, Length 767 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-216ENST00000541922 CYP46A1Q9Y6A2 500 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 TANC1Q9C0D5 1861 aa25.29■■□□□ 1.64
C2CD3-216ENST00000541922 H3BRB1 525 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 IQCF3P0C7M6 154 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 SCG2P13521 617 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 ITGB5P18084 799 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 RFC2P35250 354 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 GPR20Q99678 358 aa25.28■■□□□ 1.64
C2CD3-216ENST00000541922 TUT1Q9H6E5 874 aaKnown RBP25.28■■□□□ 1.64
C2CD3-216ENST00000541922 AKAP17AQ02040 695 aaKnown RBP25.27■■□□□ 1.64
C2CD3-216ENST00000541922 SP4Q02446 784 aa25.27■■□□□ 1.64
C2CD3-216ENST00000541922 MTMR1Q13613 665 aa25.27■■□□□ 1.64
C2CD3-216ENST00000541922 TM6SF1Q9BZW5 370 aa25.27■■□□□ 1.64
C2CD3-216ENST00000541922 SEMA6BQ9H3T3 888 aa25.27■■□□□ 1.64
C2CD3-216ENST00000541922 CXXC1Q9P0U4 656 aaPredicted RBP25.27■■□□□ 1.64
C2CD3-216ENST00000541922 STXBP5LQ9Y2K9 1186 aa25.27■■□□□ 1.64
C2CD3-216ENST00000541922 TMEM265A0A087WTH1 108 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 PRPF3O43395 683 aaKnown RBP25.26■■□□□ 1.63
C2CD3-216ENST00000541922 DNAJB2P25686 324 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 PDIA3P30101 505 aaKnown RBP25.26■■□□□ 1.63
C2CD3-216ENST00000541922 EVCP57679 992 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 AFAP1L1Q8TED9 768 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 VWCEQ96DN2 955 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 PGBD1Q96JS3 809 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 ANO3Q9BYT9 981 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 JADE2Q9NQC1 790 aa25.26■■□□□ 1.63
C2CD3-216ENST00000541922 GRXCR1A8MXD5 290 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 MAFGO15525 162 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 ATP9AO75110 1047 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 KCNA2P16389 499 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 CCT2P78371 535 aaKnown RBP25.25■■□□□ 1.63
C2CD3-216ENST00000541922 PTK7Q13308 1070 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 AP3B2Q13367 1082 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 CCDC12Q8WUD4 166 aaPredicted RBP25.25■■□□□ 1.63
C2CD3-216ENST00000541922 DHX38Q92620 1227 aaKnown RBP25.25■■□□□ 1.63
C2CD3-216ENST00000541922 GUCD1Q96NT3 240 aa25.25■■□□□ 1.63
C2CD3-216ENST00000541922 TTYH1Q9H313 450 aaPredicted RBP25.25■■□□□ 1.63
C2CD3-216ENST00000541922 ZBBXA8MT70 800 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 ACTN1P12814 892 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 ZNF200P98182 395 aaPredicted RBP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 TOB2Q14106 344 aaPredicted RBP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 UTP14CQ5TAP6 766 aaKnown RBP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 PHKBQ93100 1093 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 MXRA8Q9BRK3 442 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 UPF3BQ9BZI7 483 aaKnown RBP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 FTOQ9C0B1 505 aaKnown RBP eCLIP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 TMEM260Q9NX78 707 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 PKD2L1Q9P0L9 805 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 ZNF215Q9UL58 517 aaPredicted RBP25.24■■□□□ 1.63
C2CD3-216ENST00000541922 TELO2Q9Y4R8 837 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 SLC4A7Q9Y6M7 1214 aa25.24■■□□□ 1.63
C2CD3-216ENST00000541922 SELPP16109 830 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 CLK2P49760 499 aaKnown RBP25.23■■□□□ 1.63
C2CD3-216ENST00000541922 RBL2Q08999 1139 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 NTRK3Q16288 839 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 PKN1Q16512 942 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 LRRC8DQ7L1W4 858 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 TRIM50Q86XT4 487 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 TIFAQ96CG3 184 aa25.23■■□□□ 1.63
C2CD3-216ENST00000541922 RNF26Q9BY78 433 aaPredicted RBP25.23■■□□□ 1.63
C2CD3-216ENST00000541922 NCOA5Q9HCD5 579 aaKnown RBP25.23■■□□□ 1.63
C2CD3-216ENST00000541922 ESYT2A0FGR8 921 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 C17orf102A2RUQ5 167 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 SMIM10L2AP0DMW4 78 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 SMIM10L2BP0DMW5 78 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 CKBP12277 381 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 IFNAR1P17181 557 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 HIC1Q14526 733 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 JAKMIP3Q5VZ66 844 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 SLC26A6Q9BXS9 759 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 PBX4Q9BYU1 374 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 ZMYND12Q9H0C1 365 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 C6orf50Q9HD87 102 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 KAT6AQ92794 2004 aa25.22■■□□□ 1.63
C2CD3-216ENST00000541922 TET1Q8NFU7 2136 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 PPFIA3O75145 1194 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 PARNO95453 639 aaKnown RBP25.21■■□□□ 1.63
C2CD3-216ENST00000541922 TCF7P36402 384 aaPredicted RBP25.21■■□□□ 1.63
C2CD3-216ENST00000541922 SREBF1P36956 1147 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 PBX2P40425 430 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 CEP55Q53EZ4 464 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 SEPT1Q8WYJ6 367 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 ATP6V0A1Q93050 837 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 CDX2Q99626 313 aaPredicted RBP25.21■■□□□ 1.63
C2CD3-216ENST00000541922 RNPEPQ9H4A4 650 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 KCNH7Q9NS40 1196 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 PDRG1Q9NUG6 133 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 MSRAQ9UJ68 235 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 GBF1Q92538 1859 aa25.21■■□□□ 1.63
C2CD3-216ENST00000541922 GNA11P29992 359 aa25.2■■□□□ 1.62
C2CD3-216ENST00000541922 ZNF76P36508 570 aa25.2■■□□□ 1.62
C2CD3-216ENST00000541922 RAB30Q15771 203 aa25.2■■□□□ 1.62
C2CD3-216ENST00000541922 MCTP2Q6DN12 878 aa25.2■■□□□ 1.62
C2CD3-216ENST00000541922 CYP2W1Q8TAV3 490 aa25.2■■□□□ 1.62
C2CD3-216ENST00000541922 ZNF274Q96GC6 653 aaPredicted RBP25.2■■□□□ 1.62
C2CD3-216ENST00000541922 LAMA2P24043 3122 aaKnown RBP25.2■■□□□ 1.62
C2CD3-216ENST00000541922 GSTTP1A0A1W2PQM5 241 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 GNAT1P11488 350 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 HOXC8P31273 242 aa25.19■■□□□ 1.62
C2CD3-216ENST00000541922 ARHGAP4P98171 946 aa25.19■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms