RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 TXLNBQ8N3L3 684 aa14.96□□□□□ -0.02
PTPN1-202ENST00000541713 KRT12Q99456 494 aa14.96□□□□□ -0.02
PTPN1-202ENST00000541713 LZTS2Q9BRK4 669 aa14.96□□□□□ -0.02
PTPN1-202ENST00000541713 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 A0A1W2PQC6 194 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 GCNT3O95395 438 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 IBSPP21815 317 aaPredicted RBP14.95□□□□□ -0.02
PTPN1-202ENST00000541713 USP8P40818 1118 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 PAFAH1B1P43034 410 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 CASP4P49662 377 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 EMILIN3Q9NT22 766 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 NFU1Q9UMS0 254 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 DDX60Q8IY21 1712 aaKnown RBP14.95□□□□□ -0.02
PTPN1-202ENST00000541713 A0A087X0T9 212 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 FAM228BP0C875 321 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 MYBP10242 640 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 KLRC1P26715 233 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 CHRNA5P30532 468 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 SHMT1P34896 483 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 KCNMA1Q12791 1236 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 CCDC70Q6NSX1 233 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 MTMR9Q96QG7 549 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 OSBPL9Q96SU4 736 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 RUFY1Q96T51 708 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 SAMM50Q9Y512 469 aa14.95□□□□□ -0.02
PTPN1-202ENST00000541713 PSMD14O00487 310 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 MAP2K7O14733 419 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 ZC2HC1CQ53FD0 456 aaPredicted RBP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 CT47A1Q5JQC4 288 aaPredicted RBP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SFMBT2Q5VUG0 894 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 CENPPQ6IPU0 288 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SFR1Q86XK3 245 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 DDX42Q86XP3 938 aaKnown RBP eCLIP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 MSANTD4Q8NCY6 345 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SPATA4Q8NEY3 305 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 ALS2CR12Q96Q35 445 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 HOMER2Q9NSB8 354 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 COL4A3BPQ9Y5P4 624 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 EIF3CLB5ME19 914 aaKnown RBP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 BACH1O14867 736 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 GH2P01242 217 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 COPB2P35606 906 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 GALNT17Q6IS24 598 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 C8orf74Q6P047 294 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SLF2Q8IX21 1173 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 TEKT1Q969V4 418 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 P2RX7Q99572 595 aaKnown RBP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 EIF3CQ99613 913 aaKnown RBP14.94□□□□□ -0.02
PTPN1-202ENST00000541713 NUP58Q9BVL2 599 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 EPB41L5Q9HCM4 733 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 STRCQ7RTU9 1775 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SNED1Q8TER0 1413 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 GOLGA6BA6NDN3 693 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 POTEB2H3BUK9 544 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 LAD1O00515 517 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 ZBTB5O15062 677 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 KRT14P02533 472 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 PRPHP41219 470 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 CYP2J2P51589 502 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 VPS72Q15906 364 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 ANO3Q9BYT9 981 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 TTYH3Q9C0H2 523 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 GBP3Q9H0R5 595 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 RIOX1Q9H6W3 641 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 ANKRD36CQ5JPF3 1778 aa14.94□□□□□ -0.02
PTPN1-202ENST00000541713 SPDYE3A6NKU9 549 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 KCNK3O14649 394 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 ECE1P42892 770 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 ICA1Q05084 483 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 ARHGAP44Q17R89 818 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 RC3H1Q5TC82 1133 aaKnown RBP14.93□□□□□ -0.02
PTPN1-202ENST00000541713 VEZTQ9HBM0 779 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 MMP10P09238 476 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 FKBP3Q00688 224 aaKnown RBP14.93□□□□□ -0.02
PTPN1-202ENST00000541713 DAGLBQ8NCG7 672 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 SNX12Q9UMY4 172 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 SIK3Q9Y2K2 1263 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 CEP104O60308 925 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 POLD1P28340 1107 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 HPDP32754 393 aaPredicted RBP14.93□□□□□ -0.02
PTPN1-202ENST00000541713 CRKP46108 304 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 KCNH2Q12809 1159 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 SLC9C1Q4G0N8 1177 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 AFAP1L1Q8TED9 768 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 PLAGL2Q9UPG8 496 aa14.93□□□□□ -0.02
PTPN1-202ENST00000541713 TMEM110-MUSTN1A8MSY1 372 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 TLR2O60603 784 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 FAM153BP0C7A2 387 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 NMT1P30419 496 aaKnown RBP14.92□□□□□ -0.02
PTPN1-202ENST00000541713 CARSP49589 748 aaKnown RBP14.92□□□□□ -0.02
PTPN1-202ENST00000541713 FAM153CQ494X1 144 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 ASPRV1Q53RT3 343 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 CREG2Q8IUH2 290 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 CCDC65Q8IXS2 484 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 ANKS1AQ92625 1134 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 SH2D4AQ9H788 454 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 FAM153AQ9UHL3 310 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 RAB21Q9UL25 225 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 F5H6K3 240 aa14.92□□□□□ -0.02
PTPN1-202ENST00000541713 LRRN2O75325 713 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms