RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 A0A0D9SFI3 127 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 C17orf102A2RUQ5 167 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 GGPS1O95749 300 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 CFBP00751 764 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 LINC00271P0C7V0 271 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
COPA-205ENST00000541366 IL31RAQ8NI17 732 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 EDAQ92838 391 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 RNPEPQ9H4A4 650 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 VAT1LQ9HCJ6 419 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 FAM86C1Q9NVL1 165 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
COPA-205ENST00000541366 DMDP11532 3685 aa13.79□□□□□ -0.2
COPA-205ENST00000541366 RALGAPA2Q2PPJ7 1873 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 STXBP3O00186 592 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 OPLAHO14841 1288 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 PPFIA4O75335 1185 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 SMIM10L2AP0DMW4 78 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 SMIM10L2BP0DMW5 78 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 MX1P20591 662 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 TCF15Q12870 199 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 GPATCH4Q5T3I0 446 aaKnown RBP13.78□□□□□ -0.2
COPA-205ENST00000541366 ZNF589Q86UQ0 364 aaPredicted RBP13.78□□□□□ -0.2
COPA-205ENST00000541366 FIBCD1Q8N539 461 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 PBXIP1Q96AQ6 731 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 TTC14Q96N46 770 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 NEDD4P46934 1319 aa13.78□□□□□ -0.2
COPA-205ENST00000541366 PTPRZ1P23471 2315 aaPredicted RBP13.78□□□□□ -0.2
COPA-205ENST00000541366 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 M0R296 226 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 HSPD1P10809 573 aaKnown RBP13.77□□□□□ -0.21
COPA-205ENST00000541366 UBA1P22314 1058 aaKnown RBP13.77□□□□□ -0.21
COPA-205ENST00000541366 HOXC8P31273 242 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 BMPR1AP36894 532 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 SMAD4Q13485 552 aaKnown RBP13.77□□□□□ -0.21
COPA-205ENST00000541366 COL4A6Q14031 1691 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 MFSD6Q6ZSS7 791 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 TRIM67Q6ZTA4 783 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 MCF2L2Q86YR7 1114 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 PDCD2LQ9BRP1 358 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 SPTBN4Q9H254 2564 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 JMJD4Q9H9V9 463 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 ALG13Q9NP73 1137 aaKnown RBP13.77□□□□□ -0.21
COPA-205ENST00000541366 SETD4Q9NVD3 440 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 RCAN3Q9UKA8 241 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
COPA-205ENST00000541366 TELO2Q9Y4R8 837 aa13.77□□□□□ -0.21
COPA-205ENST00000541366 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 H3BRB1 525 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
COPA-205ENST00000541366 HOXA13P31271 388 aaPredicted RBP13.76□□□□□ -0.21
COPA-205ENST00000541366 PTPN5P54829 565 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 CAMK1Q14012 370 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 PNMA1Q8ND90 353 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 POP1Q99575 1024 aaKnown RBP13.76□□□□□ -0.21
COPA-205ENST00000541366 TUT1Q9H6E5 874 aaKnown RBP13.76□□□□□ -0.21
COPA-205ENST00000541366 HELLSQ9NRZ9 838 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 CD207Q9UJ71 328 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 DOCK5Q9H7D0 1870 aa13.76□□□□□ -0.21
COPA-205ENST00000541366 NCK2O43639 380 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 ST18O60284 1047 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 LGALS2P05162 132 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 HSD17B4P51659 736 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 NMIQ13287 307 aaPredicted RBP13.75□□□□□ -0.21
COPA-205ENST00000541366 ADAM15Q13444 863 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 BMP8AQ7Z5Y6 402 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 ADGRD2Q7Z7M1 963 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 TRIM50Q86XT4 487 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 C11orf84Q9BUA3 381 aaPredicted RBP13.75□□□□□ -0.21
COPA-205ENST00000541366 RC3H2Q9HBD1 1191 aaKnown RBP13.75□□□□□ -0.21
COPA-205ENST00000541366 PCDHB15Q9Y5E8 787 aa13.75□□□□□ -0.21
COPA-205ENST00000541366 KMT2EQ8IZD2 1858 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 ADGRA3Q8IWK6 1321 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 PPP1R11O60927 126 aaPredicted RBP13.74□□□□□ -0.21
COPA-205ENST00000541366 CHRNA1P02708 482 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 RB1P06400 928 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 DNAJB1P25685 340 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 NDUFV1P49821 464 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 VCPP55072 806 aaKnown RBP13.74□□□□□ -0.21
COPA-205ENST00000541366 PGM5Q15124 567 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 VSIG10LQ86VR7 867 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 STAG2Q8N3U4 1231 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 EVI5LQ96CN4 794 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 MSLNLQ96KJ4 702 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 MAF1Q9H063 256 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 LMAN2LQ9H0V9 348 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 MLXIPQ9HAP2 919 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 CLEC1BQ9P126 229 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 PCDHGC5Q9Y5F6 944 aa13.74□□□□□ -0.21
COPA-205ENST00000541366 GFRA3O60609 400 aa13.73□□□□□ -0.21
COPA-205ENST00000541366 KDM4AO75164 1064 aa13.73□□□□□ -0.21
COPA-205ENST00000541366 GHRP10912 638 aa13.73□□□□□ -0.21
COPA-205ENST00000541366 RRP1P56182 461 aaKnown RBP13.73□□□□□ -0.21
COPA-205ENST00000541366 ZXDAP98168 799 aa13.73□□□□□ -0.21
COPA-205ENST00000541366 STOX1Q6ZVD7 989 aa13.73□□□□□ -0.21
COPA-205ENST00000541366 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms