RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 CLCQ05315 142 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 LCE1DQ5T752 114 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 OVOS1Q6IE37 1185 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 NLRC3Q7RTR2 1065 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 TTC5Q8N0Z6 440 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 MRRFQ96E11 262 aaKnown RBP8.26□□□□□ -1.09
TTR-203ENST00000541025 TCTN2Q96GX1 697 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 PPP1R1BQ9UD71 204 aaPredicted RBP8.26□□□□□ -1.09
TTR-203ENST00000541025 EBF1Q9UH73 591 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 ZBTB1Q9Y2K1 713 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 YBX2Q9Y2T7 364 aaKnown RBP8.26□□□□□ -1.09
TTR-203ENST00000541025 SOS1Q07889 1333 aaPredicted RBP8.26□□□□□ -1.09
TTR-203ENST00000541025 ANKRD31Q8N7Z5 1873 aa8.26□□□□□ -1.09
TTR-203ENST00000541025 CHD4Q14839 1912 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 SSU72P8A0A1W2PR75 194 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 CLEC3AO75596 197 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 MCM4P33991 863 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 TAF7Q15545 349 aaPredicted RBP8.25□□□□□ -1.09
TTR-203ENST00000541025 GK5Q6ZS86 529 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 LRRC56Q8IYG6 542 aaPredicted RBP8.25□□□□□ -1.09
TTR-203ENST00000541025 PNISRQ8TF01 805 aaKnown RBP8.25□□□□□ -1.09
TTR-203ENST00000541025 KCNK12Q9HB15 430 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 SRP68Q9UHB9 627 aaKnown RBP8.25□□□□□ -1.09
TTR-203ENST00000541025 USP16Q9Y5T5 823 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 ANKRD36CQ5JPF3 1778 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 DLEC1Q9Y238 1755 aa8.25□□□□□ -1.09
TTR-203ENST00000541025 COL15A1P39059 1388 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 ETV2O00321 342 aaPredicted RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 APAF1O14727 1248 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 PEX10O60683 326 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 NME1P15531 152 aaKnown RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 VAMP1P23763 118 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 HMGB2P26583 209 aaKnown RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 RPL10P27635 214 aaKnown RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 PIP4K2AP48426 406 aaPredicted RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 PCBP3P57721 371 aaKnown RBP8.24□□□□□ -1.09
TTR-203ENST00000541025 TIGD5Q53EQ6 642 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 ATG14Q6ZNE5 492 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 C1QL4Q86Z23 238 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 G6PC3Q9BUM1 346 aa8.24□□□□□ -1.09
TTR-203ENST00000541025 UTRNP46939 3433 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 TCAF2A6NFQ2 919 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 RECKO95980 971 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 A1BGP04217 495 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 GYS1P13807 737 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 CANXP27824 592 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 POLD1P28340 1107 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 POLR2BP30876 1174 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 EIF4A1P60842 406 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 INTS4Q96HW7 963 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 FOXP3Q9BZS1 431 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 ZNF552Q9H707 407 aaPredicted RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 GPR160Q9UJ42 338 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 ZMYM5Q9UJ78 669 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 TCFL5Q9UL49 500 aa8.23□□□□□ -1.09
TTR-203ENST00000541025 SMG5Q9UPR3 1016 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 USP42Q9H9J4 1324 aaKnown RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 COL11A2P13942 1736 aaPredicted RBP8.23□□□□□ -1.09
TTR-203ENST00000541025 MEIS3P2A8K0S8 358 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 NPIPB6E9PJ23 425 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 TNFRSF10CO14798 259 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 RFC4P35249 363 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 KIR2DL1P43626 348 aaPredicted RBP8.22□□□□□ -1.09
TTR-203ENST00000541025 KIR2DL2P43627 348 aaPredicted RBP8.22□□□□□ -1.09
TTR-203ENST00000541025 EIF5P55010 431 aaKnown RBP8.22□□□□□ -1.09
TTR-203ENST00000541025 LMOD3Q0VAK6 560 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 KCNA10Q16322 511 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 INTS3Q68E01 1043 aaKnown RBP8.22□□□□□ -1.09
TTR-203ENST00000541025 TMC3Q7Z5M5 1100 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 KIAA0825Q8IV33 1275 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 NLGN2Q8NFZ4 835 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 SHISA4Q96DD7 197 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 EAF1Q96JC9 268 aaPredicted RBP8.22□□□□□ -1.09
TTR-203ENST00000541025 SYT17Q9BSW7 474 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 SPON2Q9BUD6 331 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 PRDM14Q9GZV8 571 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 CD320Q9NPF0 282 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 TSPYL4Q9UJ04 414 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 ARFGEF2Q9Y6D5 1785 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 ARFGEF1Q9Y6D6 1849 aa8.22□□□□□ -1.09
TTR-203ENST00000541025 SIGLEC6O43699 453 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 PSPNO60542 156 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 STARD3NLO95772 234 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 MMP10P09238 476 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 SNRPA1P09661 255 aaKnown RBP8.21□□□□□ -1.1
TTR-203ENST00000541025 KRT24Q2M2I5 525 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 DHRS1Q96LJ7 313 aa8.21□□□□□ -1.1
TTR-203ENST00000541025 LAMB2P55268 1798 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 CCDC88AQ3V6T2 1871 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 CHL1O00533 1208 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 ZSCAN22P10073 491 aaPredicted RBP8.2□□□□□ -1.1
TTR-203ENST00000541025 ENDOUP21128 410 aaKnown RBP8.2□□□□□ -1.1
TTR-203ENST00000541025 PDE6BP35913 854 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 ZNF76P36508 570 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 FANCCQ00597 558 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 DDR1Q08345 913 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 SNW1Q13573 536 aaKnown RBP8.2□□□□□ -1.1
TTR-203ENST00000541025 SLC14A2Q15849 920 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 MAP6Q96JE9 813 aa8.2□□□□□ -1.1
TTR-203ENST00000541025 TEX13AQ9BXU3 409 aaPredicted RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms