RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 SP2Q02086 613 aa31.11■■■□□ 2.57
CHFR-218ENST00000540963 SMC5Q8IY18 1101 aa31.11■■■□□ 2.57
CHFR-218ENST00000540963 FAM86C2PA6NEL3 165 aa31.1■■■□□ 2.57
CHFR-218ENST00000540963 H3BNC9 293 aa31.1■■■□□ 2.57
CHFR-218ENST00000540963 PPP1R11O60927 126 aaPredicted RBP31.1■■■□□ 2.57
CHFR-218ENST00000540963 PALM3A6NDB9 673 aaPredicted RBP31.09■■■□□ 2.57
CHFR-218ENST00000540963 SEC23AQ15436 765 aa31.09■■■□□ 2.57
CHFR-218ENST00000540963 YME1L1Q96TA2 773 aa31.09■■■□□ 2.57
CHFR-218ENST00000540963 USP26Q9BXU7 913 aa31.09■■■□□ 2.57
CHFR-218ENST00000540963 MAD2L2Q9UI95 211 aa31.09■■■□□ 2.57
CHFR-218ENST00000540963 MUC6Q6W4X9 2439 aa31.09■■■□□ 2.57
CHFR-218ENST00000540963 GCOM1H8Y6P7 765 aaPredicted RBP31.08■■■□□ 2.57
CHFR-218ENST00000540963 STAM2O75886 525 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 POLR2MP0CAP2 368 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 SMIM10L2AP0DMW4 78 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 SMIM10L2BP0DMW5 78 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 GNAT1P11488 350 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 IL9P15248 144 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 HOXA13P31271 388 aaPredicted RBP31.08■■■□□ 2.57
CHFR-218ENST00000540963 COL19A1Q14993 1142 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 PLEKHM2Q8IWE5 1019 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 IL31RAQ8NI17 732 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 APBB2Q92870 758 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 FAM50BQ9Y247 325 aa31.08■■■□□ 2.57
CHFR-218ENST00000540963 PIEZO1Q92508 2521 aa31.07■■■□□ 2.57
CHFR-218ENST00000540963 LGALS2P05162 132 aa31.07■■■□□ 2.56
CHFR-218ENST00000540963 SSTR3P32745 418 aaPredicted RBP31.07■■■□□ 2.56
CHFR-218ENST00000540963 GNPTABQ3T906 1256 aa31.07■■■□□ 2.56
CHFR-218ENST00000540963 BANK1Q8NDB2 785 aa31.07■■■□□ 2.56
CHFR-218ENST00000540963 PABPC5Q96DU9 382 aaKnown RBP31.07■■■□□ 2.56
CHFR-218ENST00000540963 RNPEPQ9H4A4 650 aa31.07■■■□□ 2.56
CHFR-218ENST00000540963 TREHO43280 583 aa31.06■■■□□ 2.56
CHFR-218ENST00000540963 ICAM3P32942 547 aa31.06■■■□□ 2.56
CHFR-218ENST00000540963 GPM6BQ13491 265 aa31.06■■■□□ 2.56
CHFR-218ENST00000540963 TMEM192Q8IY95 271 aa31.06■■■□□ 2.56
CHFR-218ENST00000540963 RIOX1Q9H6W3 641 aa31.06■■■□□ 2.56
CHFR-218ENST00000540963 NOP56O00567 594 aaKnown RBP31.05■■■□□ 2.56
CHFR-218ENST00000540963 SORBS3O60504 671 aa31.05■■■□□ 2.56
CHFR-218ENST00000540963 NEDD9Q14511 834 aa31.05■■■□□ 2.56
CHFR-218ENST00000540963 CHD1LQ86WJ1 897 aa31.05■■■□□ 2.56
CHFR-218ENST00000540963 PRKAG3Q9UGI9 489 aa31.05■■■□□ 2.56
CHFR-218ENST00000540963 KAT6AQ92794 2004 aa31.05■■■□□ 2.56
CHFR-218ENST00000540963 FRMPD4Q14CM0 1322 aa31.04■■■□□ 2.56
CHFR-218ENST00000540963 NCK2O43639 380 aa31.04■■■□□ 2.56
CHFR-218ENST00000540963 METTL7BQ6UX53 244 aa31.04■■■□□ 2.56
CHFR-218ENST00000540963 YTHDC1Q96MU7 727 aaKnown RBP31.04■■■□□ 2.56
CHFR-218ENST00000540963 INPP4AQ96PE3 977 aaPredicted RBP31.04■■■□□ 2.56
CHFR-218ENST00000540963 RWDD1Q9H446 243 aaPredicted RBP31.04■■■□□ 2.56
CHFR-218ENST00000540963 NSUN3Q9H649 340 aaKnown RBP31.04■■■□□ 2.56
CHFR-218ENST00000540963 LOC101059915A0A1B0GWI6 518 aaPredicted RBP31.03■■■□□ 2.56
CHFR-218ENST00000540963 FAM26DQ5JW98 314 aa31.03■■■□□ 2.56
CHFR-218ENST00000540963 GPKOWQ92917 476 aaPredicted RBP eCLIP31.03■■■□□ 2.56
CHFR-218ENST00000540963 BAZ2BQ9UIF8 2168 aaKnown RBP31.03■■■□□ 2.56
CHFR-218ENST00000540963 GRM4Q14833 912 aa31.02■■■□□ 2.56
CHFR-218ENST00000540963 FCHSD1Q86WN1 690 aa31.02■■■□□ 2.56
CHFR-218ENST00000540963 ZNF215Q9UL58 517 aaPredicted RBP31.02■■■□□ 2.56
CHFR-218ENST00000540963 PNMA6FA0A0J9YX94 578 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 SPATA31C2B4DYI2 1134 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 ADAM17P78536 824 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 NUCB1Q02818 461 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 TCEAL5Q5H9L2 206 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 HOMER1Q86YM7 354 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 PIGSQ96S52 555 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 GPR20Q99678 358 aa31.01■■■□□ 2.55
CHFR-218ENST00000540963 IFIH1Q9BYX4 1025 aaKnown RBP31.01■■■□□ 2.55
CHFR-218ENST00000540963 POTEB3A0JP26 581 aa31■■■□□ 2.55
CHFR-218ENST00000540963 C5orf67F2Z3F1 127 aa31■■■□□ 2.55
CHFR-218ENST00000540963 H3BQ06 376 aaPredicted RBP31■■■□□ 2.55
CHFR-218ENST00000540963 FIBPO43427 364 aa31■■■□□ 2.55
CHFR-218ENST00000540963 DCXO43602 365 aa31■■■□□ 2.55
CHFR-218ENST00000540963 UPP2O95045 317 aa31■■■□□ 2.55
CHFR-218ENST00000540963 RB1P06400 928 aa31■■■□□ 2.55
CHFR-218ENST00000540963 MRPS9P82933 396 aaKnown RBP31■■■□□ 2.55
CHFR-218ENST00000540963 B4GALNT3Q6L9W6 998 aa31■■■□□ 2.55
CHFR-218ENST00000540963 POTEBQ6S5H4 581 aa31■■■□□ 2.55
CHFR-218ENST00000540963 RPAINQ86UA6 219 aa31■■■□□ 2.55
CHFR-218ENST00000540963 KCNH6Q9H252 994 aa31■■■□□ 2.55
CHFR-218ENST00000540963 RWDD3Q9Y3V2 267 aa31■■■□□ 2.55
CHFR-218ENST00000540963 DOCK5Q9H7D0 1870 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 CTSHP09668 335 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 TRDNQ13061 729 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 CSPP1Q1MSJ5 1256 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 SLC35G1Q2M3R5 365 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 CYB5R4Q7L1T6 521 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 IL17RAQ96F46 866 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 SENP7Q9BQF6 1050 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 LMAN2LQ9H0V9 348 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 SETD4Q9NVD3 440 aa30.99■■■□□ 2.55
CHFR-218ENST00000540963 CYFIP1Q7L576 1253 aa30.98■■■□□ 2.55
CHFR-218ENST00000540963 ZFP91Q96JP5 570 aaPredicted RBP30.98■■■□□ 2.55
CHFR-218ENST00000540963 BCAS3Q9H6U6 928 aa30.98■■■□□ 2.55
CHFR-218ENST00000540963 NRCAMQ92823 1304 aa30.98■■■□□ 2.55
CHFR-218ENST00000540963 C19orf67A6NJJ6 358 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 CYTH3O43739 400 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 ZP2Q05996 745 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 XRRA1Q6P2D8 792 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 FIBCD1Q8N539 461 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 OSBPL7Q9BZF2 842 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 MYO7AQ13402 2215 aa30.97■■■□□ 2.55
CHFR-218ENST00000540963 ATG2AQ2TAZ0 1938 aa30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms