RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 PIK3CDO00329 1044 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 FIBPO43427 364 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 ATP9AO75110 1047 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 SMIM10L2AP0DMW4 78 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 SMIM10L2BP0DMW5 78 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 CPA1P15085 419 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 GNAQP50148 359 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 RBL2Q08999 1139 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 GNPTABQ3T906 1256 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 PCNX4Q63HM2 1172 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 KRT40Q6A162 431 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 NEK1Q96PY6 1258 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 SLC9A7Q96T83 725 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 RNPEPQ9H4A4 650 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 TUT1Q9H6E5 874 aaKnown RBP16.67■□□□□ 0.26
MSRB3-209ENST00000540804 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
MSRB3-209ENST00000540804 NOP56O00567 594 aaKnown RBP16.66■□□□□ 0.26
MSRB3-209ENST00000540804 TREHO43280 583 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 CXCL10P02778 98 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 CALM1P0DP23 149 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 CALM2P0DP24 149 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 CALM3P0DP25 149 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 TAP1Q03518 808 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 METTL7BQ6UX53 244 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 HEATR3Q7Z4Q2 680 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 PSTPIP2Q9H939 334 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 SETD4Q9NVD3 440 aa16.66■□□□□ 0.26
MSRB3-209ENST00000540804 C17orf102A2RUQ5 167 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 STAM2O75886 525 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 ITGB5P18084 799 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 THPOP40225 353 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 EXOSC10Q01780 885 aaKnown RBP16.65■□□□□ 0.26
MSRB3-209ENST00000540804 NEDD9Q14511 834 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 TYW1BQ6NUM6 668 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 CNKSR3Q6P9H4 555 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 SERINC5Q86VE9 423 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 SGMS1Q86VZ5 419 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 PHOSPHO2Q8TCD6 241 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 ARNTL2Q8WYA1 636 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 ATP6V0A1Q93050 837 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 CNTNAP5Q8WYK1 1306 aa16.65■□□□□ 0.26
MSRB3-209ENST00000540804 TLL1O43897 1013 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 CDC45O75419 566 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 BAIAP3O94812 1187 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 CTSHP09668 335 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 KCNJ6P48051 423 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 WWC2Q6AWC2 1192 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.64■□□□□ 0.25
MSRB3-209ENST00000540804 PCDHA6Q9UN73 950 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 PCDHA8Q9Y5H6 950 aa16.64■□□□□ 0.25
MSRB3-209ENST00000540804 KCNA2P16389 499 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 CDC27P30260 824 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 HOXC8P31273 242 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 FUT2Q10981 343 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 DHX32Q7L7V1 743 aaKnown RBP16.63■□□□□ 0.25
MSRB3-209ENST00000540804 NLRX1Q86UT6 975 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 DBF4BQ8NFT6 615 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 USP26Q9BXU7 913 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
MSRB3-209ENST00000540804 UBIAD1Q9Y5Z9 338 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 TET1Q8NFU7 2136 aa16.63■□□□□ 0.25
MSRB3-209ENST00000540804 MYH7BA7E2Y1 1941 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 KLF18A0A0U1RQI7 1052 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 GSTTP1A0A1W2PQM5 241 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 RSPH10B2B2RC85 870 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 LGR5O75473 907 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 RSPH10BP0C881 870 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 TCF7P36402 384 aaPredicted RBP16.62■□□□□ 0.25
MSRB3-209ENST00000540804 XRRA1Q6P2D8 792 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 CYP2W1Q8TAV3 490 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 ZBTB10Q96DT7 871 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 SENP7Q9BQF6 1050 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 ZBED2Q9BTP6 218 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 TMEM260Q9NX78 707 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 MTCH2Q9Y6C9 303 aa16.62■□□□□ 0.25
MSRB3-209ENST00000540804 V9GY48 417 aaPredicted RBP16.62■□□□□ 0.25
MSRB3-209ENST00000540804 REV3LO60673 3130 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 KIF28PB7ZC32 967 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 ADAMTS3O15072 1205 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 ZBTB43O43298 467 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 MARK3P27448 753 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 ARHGAP4P98171 946 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 IKBKEQ14164 716 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 RTN1Q16799 776 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 TJAP1Q5JTD0 557 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 LMBR1Q8WVP7 490 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 GPRASP2Q96D09 838 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 MTUS1Q9ULD2 1270 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 NAP1L2Q9ULW6 460 aaPredicted RBP16.61■□□□□ 0.25
MSRB3-209ENST00000540804 XIRP2A4UGR9 3374 aa16.61■□□□□ 0.25
MSRB3-209ENST00000540804 PTPRSQ13332 1948 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 ABHD14A-ACY1A0A1B0GW23 586 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 SPDYE3A6NKU9 549 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 GOLGA8AA7E2F4 631 aa16.6■□□□□ 0.25
MSRB3-209ENST00000540804 GOLGA8BA8MQT2 603 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms