RNA–Protein interactions for RNA: ENST00000538318.5

PTPN6-210, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 5

Gene PTPN6, Length 759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-210ENST00000538318 METTL7BQ6UX53 244 aa19.3■□□□□ 0.68
PTPN6-210ENST00000538318 IL27Q8NEV9 243 aa19.3■□□□□ 0.68
PTPN6-210ENST00000538318 CTCFLQ8NI51 663 aaPredicted RBP19.3■□□□□ 0.68
PTPN6-210ENST00000538318 PIBF1Q8WXW3 757 aa19.3■□□□□ 0.68
PTPN6-210ENST00000538318 UHRF1Q96T88 793 aaPredicted RBP19.3■□□□□ 0.68
PTPN6-210ENST00000538318 RAD9AQ99638 391 aa19.3■□□□□ 0.68
PTPN6-210ENST00000538318 USP26Q9BXU7 913 aa19.3■□□□□ 0.68
PTPN6-210ENST00000538318 TCF20Q9UGU0 1960 aaKnown RBP19.3■□□□□ 0.68
PTPN6-210ENST00000538318 RSPH10B2B2RC85 870 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 PIK3CDO00329 1044 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 NOP56O00567 594 aaKnown RBP19.29■□□□□ 0.68
PTPN6-210ENST00000538318 LGR5O75473 907 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 RSPH10BP0C881 870 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 KIF5BP33176 963 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 THPOP40225 353 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 MKRN4PQ13434 485 aaPredicted RBP19.29■□□□□ 0.68
PTPN6-210ENST00000538318 SKIV2LQ15477 1246 aaKnown RBP19.29■□□□□ 0.68
PTPN6-210ENST00000538318 CYFIP1Q7L576 1253 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 ATP6V0A1Q93050 837 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 RRP36Q96EU6 259 aaKnown RBP19.29■□□□□ 0.68
PTPN6-210ENST00000538318 LZTS2Q9BRK4 669 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 MYL10Q9BUA6 226 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 RNPEPQ9H4A4 650 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 RTEL1Q9NZ71 1219 aa19.29■□□□□ 0.68
PTPN6-210ENST00000538318 DOCK5Q9H7D0 1870 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 MEIS2O14770 477 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 FIBPO43427 364 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 SMIM10L2AP0DMW4 78 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 SMIM10L2BP0DMW5 78 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 IRX6P78412 446 aaPredicted RBP19.28■□□□□ 0.68
PTPN6-210ENST00000538318 PCNX4Q63HM2 1172 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 XRRA1Q6P2D8 792 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 USP17L6PQ6QN14 398 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 CASC1Q6TDU7 716 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 TMTC2Q8N394 836 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 SMARCC2Q8TAQ2 1214 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 GPR20Q99678 358 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 SENP7Q9BQF6 1050 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 LMCD1Q9NZU5 365 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 COG5Q9UP83 839 aa19.28■□□□□ 0.68
PTPN6-210ENST00000538318 COL4A4P53420 1690 aaPredicted RBP19.27■□□□□ 0.68
PTPN6-210ENST00000538318 RBAK-RBAKDNI3L0D1 243 aa19.27■□□□□ 0.68
PTPN6-210ENST00000538318 PRC1O43663 620 aa19.27■□□□□ 0.68
PTPN6-210ENST00000538318 MCM5P33992 734 aa19.27■□□□□ 0.68
PTPN6-210ENST00000538318 DBF4BQ8NFT6 615 aa19.27■□□□□ 0.68
PTPN6-210ENST00000538318 CUL5Q93034 780 aa19.27■□□□□ 0.68
PTPN6-210ENST00000538318 SEC63Q9UGP8 760 aaKnown RBP19.27■□□□□ 0.68
PTPN6-210ENST00000538318 MICAL3Q7RTP6 2002 aa19.27■□□□□ 0.67
PTPN6-210ENST00000538318 LINC01553A4QN01 128 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 SH2B2O14492 632 aaPredicted RBP19.26■□□□□ 0.67
PTPN6-210ENST00000538318 TREHO43280 583 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 CAND2O75155 1236 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 GNAQP50148 359 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 KCNQ1P51787 676 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 ERVK-21P61565 698 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 PLEKHG4Q58EX7 1191 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.26■□□□□ 0.67
PTPN6-210ENST00000538318 SRBD1Q8N5C6 995 aaKnown RBP19.26■□□□□ 0.67
PTPN6-210ENST00000538318 TMEM87BQ96K49 555 aa19.26■□□□□ 0.67
PTPN6-210ENST00000538318 TGS1Q96RS0 853 aaKnown RBP19.26■□□□□ 0.67
PTPN6-210ENST00000538318 LSG1Q9H089 658 aaKnown RBP19.26■□□□□ 0.67
PTPN6-210ENST00000538318 SIP14410 1827 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 PLEKHA8P1O95397 391 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 GNAT1P11488 350 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 LIFRP42702 1097 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 NFXL1Q6ZNB6 911 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 GDPD5Q8WTR4 605 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 SUGCTQ9HAC7 445 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 SETD4Q9NVD3 440 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 TELO2Q9Y4R8 837 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 INSL6Q9Y581 213 aa19.25■□□□□ 0.67
PTPN6-210ENST00000538318 CCDC69A6NI79 296 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 AMHP03971 560 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 CALM1P0DP23 149 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 CALM2P0DP24 149 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 CALM3P0DP25 149 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 ADAM17P78536 824 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 HTRA4P83105 476 aaPredicted RBP19.24■□□□□ 0.67
PTPN6-210ENST00000538318 COL9A3Q14050 684 aaPredicted RBP19.24■□□□□ 0.67
PTPN6-210ENST00000538318 FAM117BQ6P1L5 589 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 NLRX1Q86UT6 975 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 TRIM50Q86XT4 487 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 GIMAP8Q8ND71 665 aaPredicted RBP19.24■□□□□ 0.67
PTPN6-210ENST00000538318 HLA-CQ95604 372 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 NECAB3Q96P71 396 aaPredicted RBP19.24■□□□□ 0.67
PTPN6-210ENST00000538318 ZNF215Q9UL58 517 aaPredicted RBP19.24■□□□□ 0.67
PTPN6-210ENST00000538318 MTUS1Q9ULD2 1270 aa19.24■□□□□ 0.67
PTPN6-210ENST00000538318 SLC27A2O14975 620 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 NECTIN1Q15223 517 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 CMTR1Q8N1G2 835 aaKnown RBP19.23■□□□□ 0.67
PTPN6-210ENST00000538318 GPRASP2Q96D09 838 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 PSTPIP2Q9H939 334 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 KAT6AQ92794 2004 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 BRWD1Q9NSI6 2320 aa19.23■□□□□ 0.67
PTPN6-210ENST00000538318 RXRAP19793 462 aa19.22■□□□□ 0.67
PTPN6-210ENST00000538318 UTP14CQ5TAP6 766 aaKnown RBP19.22■□□□□ 0.67
PTPN6-210ENST00000538318 MYOCDQ8IZQ8 938 aa19.22■□□□□ 0.67
PTPN6-210ENST00000538318 SP7Q8TDD2 431 aaPredicted RBP19.22■□□□□ 0.67
PTPN6-210ENST00000538318 SEPT8Q92599 483 aa19.22■□□□□ 0.67
PTPN6-210ENST00000538318 CDHR1Q96JP9 859 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms