RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 AMPD3Q01432 767 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 MIER3Q7Z3K6 550 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 ERMNQ8TAM6 284 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 DDX12PQ92771 950 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 FAM212AQ96EL1 285 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 DYDC2Q96IM9 177 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SCLT1Q96NL6 688 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 DESI2Q9BSY9 194 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 IKZF4Q9H2S9 585 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SUGCTQ9HAC7 445 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SPTLC3Q9NUV7 552 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 PCDHB13Q9Y5F0 798 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 BRCA2P51587 3418 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 BACE1P56817 501 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 STK4Q13043 487 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SCYL3Q8IZE3 742 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 MRPL44Q9H9J2 332 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 EMILIN3Q9NT22 766 aa9.11□□□□□ -0.95
ABCA4-207ENST00000536513 SEPT11Q9NVA2 429 aaKnown RBP9.11□□□□□ -0.95
ABCA4-207ENST00000536513 MEIS2O14770 477 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 TEX33O43247 280 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ACTN4O43707 911 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 CTNND1O60716 968 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 PRPF6O94906 941 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 FAM13AO94988 1023 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 BMP6P22004 513 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 USP8P40818 1118 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 RCAN1P53805 252 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 PAK1Q13153 545 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 PTPROQ16827 1216 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 DHX40Q8IX18 779 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ANKRD13CQ8N6S4 541 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 RUFY1Q96T51 708 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 P2RX7Q99572 595 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ADARB2Q9NS39 739 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 FAM207AQ9NSI2 230 aaPredicted RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 RSPH10B2B2RC85 870 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 FZD9O00144 591 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 IPO5O00410 1097 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 TRIM66O15016 1216 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 RSPH10BP0C881 870 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 RPS12P25398 132 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 SMC1AQ14683 1233 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 FAM83AQ86UY5 434 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ANKRD7Q92527 254 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 KCNF1Q9H3M0 494 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 PCIF1Q9H4Z3 704 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 SMCHD1A6NHR9 2005 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 LAMB2P55268 1798 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 C10orf71Q711Q0 1435 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 KIAA0754O94854 1291 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 TRIM21P19474 475 aaKnown RBP9.1□□□□□ -0.95
ABCA4-207ENST00000536513 TRAPPC10P48553 1259 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 CYP2J2P51589 502 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 NPEPPSP55786 919 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 MAP3K9P80192 1104 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 Q3C1V9 767 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 CAGE1Q8TC20 777 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 GLG1Q92896 1179 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ELMO3Q96BJ8 720 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 SH3GLB2Q9NR46 395 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 LY75O60449 1722 aa9.1□□□□□ -0.95
ABCA4-207ENST00000536513 ARHGEF35A5YM69 484 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 PLA2G4BP0C869 781 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MTMR1Q13613 665 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 COG2Q14746 738 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 XKR9Q5GH70 373 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 CT47A1Q5JQC4 288 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-207ENST00000536513 GJC2Q5T442 439 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-207ENST00000536513 FAM102BQ5T8I3 360 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 PLA2G4FQ68DD2 849 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 NLRX1Q86UT6 975 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 OPTNQ96CV9 577 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 BICD1Q96G01 975 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 NLRC4Q9NPP4 1024 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 PANK4Q9NVE7 773 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 PUF60Q9UHX1 559 aaKnown RBP9.09□□□□□ -0.95
ABCA4-207ENST00000536513 FEM1BQ9UK73 627 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 LAMA4Q16363 1823 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 DUOX1Q9NRD9 1551 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MYMKA6NI61 221 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MSH4O15457 936 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ZMYND10O75800 440 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 GALNT17Q6IS24 598 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 CYFIP1Q7L576 1253 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 CDCA5Q96FF9 252 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 EHMT1Q9H9B1 1298 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 LZTFL1Q9NQ48 299 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MORC2Q9Y6X9 1032 aaPredicted RBP9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MYO1CO00159 1063 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 EML1O00423 815 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ZSCAN12O43309 604 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 MED24O75448 989 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 IVLP07476 585 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 HUNKP57058 714 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ECM1Q16610 540 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ARMCX6Q7L4S7 300 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ANKRD13AQ8IZ07 590 aa9.09□□□□□ -0.95
ABCA4-207ENST00000536513 ANKS1AQ92625 1134 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms