RNA–Protein interactions for RNA: ENST00000536194.1

TNFRSF1A-208, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-208ENST00000536194 KRT2P35908 639 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZNF76P36508 570 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CDK7P50613 346 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SP4Q02446 784 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NONOQ15233 471 aaKnown RBP eCLIP12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PIK3AP1Q6ZUJ8 805 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 DIS3L2Q8IYB7 885 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 C7orf61Q8IZ16 206 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 KAT2BQ92831 832 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CDHR1Q96JP9 859 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 UIMC1Q96RL1 719 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GPR20Q99678 358 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MLXIPQ9HAP2 919 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 AGO4Q9HCK5 861 aaKnown RBP12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 POLR3EQ9NVU0 708 aa12.88□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIP12Q14669 1992 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 A0A0U1RQG5 324 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ARVCFO00192 962 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 WNT7AO00755 349 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 EVI5O60447 810 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CABYRO75952 493 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZNF286BP0CG31 522 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GJB2P29033 226 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 USP11P51784 963 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ITGA7Q13683 1181 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIM29Q14134 588 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 DGKDQ16760 1214 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PRR16Q569H4 304 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 FBXO18Q8NFZ0 1043 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 VTI1AQ96AJ9 217 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MBOAT7Q96N66 472 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 C16orf70Q9BSU1 422 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MTG1Q9BT17 334 aaPredicted RBP12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ATP11BQ9Y2G3 1177 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NFASCO94856 1347 aa12.87□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CYP3A7-CYP3A51PA0A087WV96 503 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CCDC194A0A1B0GVG4 234 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GSTTP1A0A1W2PQM5 241 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 KIF28PB7ZC32 967 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 DHX15O43143 795 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SLC37A4O43826 429 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 KPNA6O60684 536 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PQBP1O60828 265 aaKnown RBP12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 F2P00734 622 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CYP3A7P24462 503 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SETQ01105 290 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TLE2Q04725 743 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 BRDTQ58F21 947 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ANKRD33Q7Z3H0 272 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NEK8Q86SG6 692 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIM50Q86XT4 487 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 FAM184AQ8NB25 1140 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GJA10Q969M2 543 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SNX21Q969T3 373 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 BRMS1Q9HCU9 246 aa12.86□□□□□ -0.35
TNFRSF1A-208ENST00000536194 H0YGN5 161 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 K7ELQ4 463 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 DDX39AO00148 427 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 HAS3O00219 553 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 IPO5O00410 1097 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NOP56O00567 594 aaKnown RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MSH4O15457 936 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PPFIA4O75335 1185 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CCNE2O96020 404 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 LGALS2P05162 132 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 FAAP100Q0VG06 881 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 LETM2Q2VYF4 491 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 NBPF20Q3BBV1 942 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 Q4G0T1 1027 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MOXD1Q6UVY6 613 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SH3RF1Q7Z6J0 888 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 FAM126BQ8IXS8 530 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 GIMAP8Q8ND71 665 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PCYT2Q99447 389 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZNF577Q9BSK1 485 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 JPH1Q9HDC5 661 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PDLIM7Q9NR12 457 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SLC9A2Q9UBY0 812 aa12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZMYND8Q9ULU4 1186 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF1A-208ENST00000536194 MYH9P35579 1960 aaKnown RBP12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIM43BA6NCK2 446 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 B4GALT4O60513 344 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 CD4P01730 458 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SYN1P17600 705 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TCF7P36402 384 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 PSEN2P49810 448 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ACTR2P61160 394 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 HIC1Q14526 733 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ETNPPLQ8TBG4 499 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TRIM43Q96BQ3 446 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 TOX2Q96NM4 488 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SDF4Q9BRK5 362 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 SMC3Q9UQE7 1217 aa12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF1A-208ENST00000536194 H3BRB1 525 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ATG7O95352 703 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 CLTBP09497 229 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 ITGB8P26012 769 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 MFSD10Q14728 455 aa12.83□□□□□ -0.36
TNFRSF1A-208ENST00000536194 KIAA0753Q2KHM9 967 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms