RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 LUC7LQ9NQ29 371 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 CWC15Q9P013 229 aaKnown RBP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 TSKSQ9UJT2 592 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SPATA31A6Q5VVP1 1343 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 PITPNM2Q9BZ72 1349 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L15C9J2P7 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L13C9JLJ4 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L11C9JVI0 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L18D6R9N7 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L22D6RA61 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L17D6RBQ6 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L19D6RCP7 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L20D6RJB6 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 NOL4O94818 638 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 ERCC3P19447 782 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 SCNN1DP51172 638 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 C2orf54Q08AI8 447 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L24Q0WX57 530 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 PPP4R3CPQ6ZMV5 832 aa17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.7■□□□□ 0.42
CHMP1A-202ENST00000535997 PHACTR2O75167 634 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 ZMYND10O75800 440 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 RASSF7Q02833 373 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 QRICH1Q2TAL8 776 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 MCTP2Q6DN12 878 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 LEKR1Q6ZMV7 388 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 DCAF4Q8WV16 495 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 SCFD1Q8WVM8 642 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 KCTD10Q9H3F6 313 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 RNF14Q9UBS8 474 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 SALL4Q9UJQ4 1053 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 MYH4Q9Y623 1939 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 FRMD3A2A2Y4 597 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 CYP11B2P19099 503 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 SLC1A4P43007 532 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 PAFAH1B1P43034 410 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 EDRF1Q3B7T1 1238 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 GPBP1Q86WP2 473 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 ZC3H3Q8IXZ2 948 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 DRC1Q96MC2 740 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 CRACR2AQ9BSW2 395 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 SELENOOQ9BVL4 669 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 DHX36Q9H2U1 1008 aaKnown RBP17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 KANSL2Q9H9L4 492 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 NLRC4Q9NPP4 1024 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 TBC1D7Q9P0N9 293 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 NYAP2Q9P242 653 aa17.69■□□□□ 0.42
CHMP1A-202ENST00000535997 GREB1LQ9C091 1923 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 QSER1Q2KHR3 1735 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 ZC3H4Q9UPT8 1303 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 RPS6KA5O75582 802 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 AP3B2Q13367 1082 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 ADAM9Q13443 819 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 TDRD12Q587J7 1177 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 GOLGA6L1Q8N7Z2 621 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 AENQ8WTP8 325 aaKnown RBP17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 LRRC1Q9BTT6 524 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 TLR10Q9BXR5 811 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 ANO3Q9BYT9 981 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 A0A0U1RQG5 324 aaPredicted RBP17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 POTEB3A0JP26 581 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 POTECB2RU33 542 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 UBAP1LF5GYI3 381 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 TLR2O60603 784 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 RNF40O75150 1001 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 MYBL2P10244 700 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 NFIAQ12857 509 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 CCDC181Q5TID7 509 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 HAUS3Q68CZ6 603 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 NFRKBQ6P4R8 1299 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 POTEBQ6S5H4 581 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 MXD3Q9BW11 206 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 MRIQ9BWK5 157 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 FAM204AQ9H8W3 233 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 AIPL1Q9NZN9 384 aa17.68■□□□□ 0.42
CHMP1A-202ENST00000535997 TBX3O15119 743 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 CETN3O15182 167 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 PRPF6O94906 941 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 SLC12A3P55017 1021 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 POLR2FP61218 127 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 KLHDC7AQ5VTJ3 777 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 NELFCDQ8IXH7 590 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 SEPT12Q8IYM1 358 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 ANKRD13CQ8N6S4 541 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 CRYGNQ8WXF5 182 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 FGFBP2Q9BYJ0 223 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 TULP2O00295 520 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 MEIS2O14770 477 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 KRT18P05783 430 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 IVLP07476 585 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 EEF2P13639 858 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 ALDH1B1P30837 517 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 DOK7Q18PE1 504 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 GLE1Q53GS7 698 aaKnown RBP17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 ARSHQ5FYA8 562 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 SLFN13Q68D06 897 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 ZBTB9Q96C00 473 aa17.67■□□□□ 0.42
CHMP1A-202ENST00000535997 ZDHHC15Q96MV8 337 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms