RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 IL31RAQ8NI17 732 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CUL5Q93034 780 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 ZFP91Q96JP5 570 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 C16orf70Q9BSU1 422 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 USP26Q9BXU7 913 aa15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 U3KPZ7 1027 aaPredicted RBP15□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PNMA6FA0A0J9YX94 578 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PALM3A6NDB9 673 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PPP1R11O60927 126 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GRM4Q14833 912 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 WTAPQ15007 396 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PUS10Q3MIT2 529 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 LEXMQ3ZCV2 418 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PLEKHG4Q58EX7 1191 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CATIPQ7Z7H3 387 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RUFY2Q8WXA3 655 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 APBB2Q92870 758 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 MRPL38Q96DV4 380 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 MTMR8Q96EF0 704 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 IFIH1Q9BYX4 1025 aaKnown RBP14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 FAM50BQ9Y247 325 aa14.99□□□□□ -0.01
TNFRSF1A-207ENST00000535958 FAM86C2PA6NEL3 165 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TREHO43280 583 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 FIBPO43427 364 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 HTRA4P83105 476 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SP2Q02086 613 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SP4Q02446 784 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GPM6BQ13491 265 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SEC23AQ15436 765 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 EPC2Q52LR7 807 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PTCRAQ6ISU1 281 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 METTL7BQ6UX53 244 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CYB5R4Q7L1T6 521 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CYFIP1Q7L576 1253 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GJD3Q8N144 294 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SMARCC2Q8TAQ2 1214 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PIBF1Q8WXW3 757 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RNPEPQ9H4A4 650 aa14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SEC63Q9UGP8 760 aaKnown RBP14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 ARIH1Q9Y4X5 557 aaPredicted RBP14.98□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GPR37L1O60883 481 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 ARHGAP4P98171 946 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 HIC1Q14526 733 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CSPP1Q1MSJ5 1256 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 UTP14CQ5TAP6 766 aaKnown RBP14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 BANK1Q8NDB2 785 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 NCOA7Q8NI08 942 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SP7Q8TDD2 431 aaPredicted RBP14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GPKOWQ92917 476 aaPredicted RBP eCLIP14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RIOX1Q9H6W3 641 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 SETD4Q9NVD3 440 aa14.97□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RSPH3Q86UC2 560 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 NLRX1Q86UT6 975 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 FAM178BQ8IXR5 827 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TMEM192Q8IY95 271 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 GIMAP8Q8ND71 665 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 CTCFLQ8NI51 663 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 TOP1MTQ969P6 601 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 INPP4AQ96PE3 977 aaPredicted RBP14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 BRWD1Q9NSI6 2320 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RTEL1Q9NZ71 1219 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 RWDD3Q9Y3V2 267 aa14.96□□□□□ -0.01
TNFRSF1A-207ENST00000535958 PI4K2BG5E9Z4 385 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 H3BNC9 293 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 IGHDP01880 384 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 ALADP13716 330 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 IL9P15248 144 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 HOXC8P31273 242 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 ICAM3P32942 547 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 KIF5BP33176 963 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CTNNB1P35222 781 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TRIM50Q86XT4 487 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 FIBCD1Q8N539 461 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RRP36Q96EU6 259 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 UIMC1Q96RL1 719 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GPR20Q99678 358 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NSUN3Q9H649 340 aaKnown RBP14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NLRC5Q86WI3 1866 aa14.95□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NRCAMQ92823 1304 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 COL4A6Q14031 1691 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 SPATA31C2B4DYI2 1134 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 H3BQ06 376 aaPredicted RBP14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 TAF2Q6P1X5 1199 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 XRRA1Q6P2D8 792 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 LMBR1Q8WVP7 490 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PABPC5Q96DU9 382 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 IL17RAQ96F46 866 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CDHR1Q96JP9 859 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CLDND1Q9NY35 253 aa14.94□□□□□ -0.02
TNFRSF1A-207ENST00000535958 FRMPD4Q14CM0 1322 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 RALGAPA2Q2PPJ7 1873 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 BAZ2BQ9UIF8 2168 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 GRXCR2A6NFK2 248 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 E7EWF7 191 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 NCK2O43639 380 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CYTH3O43739 400 aa14.93□□□□□ -0.02
TNFRSF1A-207ENST00000535958 CYP21A2P08686 494 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms