RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 C9orf118A6NHY6 69 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 MYO1BO43795 1136 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 LTBRP36941 435 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 ECI1P42126 302 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 TGFB2P61812 414 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 LONRF2Q1L5Z9 754 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 MCTP2Q6DN12 878 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 CPNE8Q86YQ8 564 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 RIOX2Q8IUF8 465 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 PPIL6Q8IXY8 311 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 DIO2Q92813 273 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 GORASP1Q9BQQ3 440 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 SPATA9Q9BWV2 254 aa5.34□□□□□ -1.55
USP48-215ENST00000534705 MROH2BQ7Z745 1585 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 HMGXB3Q12766 1538 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 TRAV20A0A0B4J274 112 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 GRIA2P42262 883 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 KCNJ6P48051 423 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 RPL11P62913 178 aaKnown RBP5.33□□□□□ -1.56
USP48-215ENST00000534705 ICAM4Q14773 271 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 INF2Q27J81 1249 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 MTERF2Q49AM1 385 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 WWC2Q6AWC2 1192 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 RSPO2Q6UXX9 243 aaPredicted RBP5.33□□□□□ -1.56
USP48-215ENST00000534705 CCDC103Q8IW40 242 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 DEPDC7Q96QD5 511 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 IER2Q9BTL4 223 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 CD248Q9HCU0 757 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 PPP4R1LQ9P1A2 415 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 GULP1Q9UBP9 304 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 RWDD3Q9Y3V2 267 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 TIMM13Q9Y5L4 95 aaPredicted RBP5.33□□□□□ -1.56
USP48-215ENST00000534705 WIZO95785 1651 aa5.33□□□□□ -1.56
USP48-215ENST00000534705 ATAD2BQ9ULI0 1458 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 ADCY3O60266 1144 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 DLX3O60479 287 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 PABPC1P11940 636 aaKnown RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 SLC6A11P48066 632 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 IFRD2Q12894 506 aaPredicted RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 SF1Q15637 639 aaKnown RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 ZC3H12BQ5HYM0 836 aaKnown RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 MROH9Q5TGP6 573 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 DENND5AQ6IQ26 1287 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 DPH6Q7L8W6 267 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 CIR1Q86X95 450 aaPredicted RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 DCP2Q8IU60 420 aaKnown RBP5.32□□□□□ -1.56
USP48-215ENST00000534705 PLEKHO2Q8TD55 490 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 UBXN4Q92575 508 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 DPF3Q92784 378 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 OSBP2Q969R2 916 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 DRC1Q96MC2 740 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 ZFYVE21Q9BQ24 234 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 GPR27Q9NS67 375 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 SNTG2Q9NY99 539 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 FBLN5Q9UBX5 448 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 TCAF1Q9Y4C2 921 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 X6R8D5 127 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 SMARCA2P51531 1590 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 NCAPD3P42695 1498 aa5.32□□□□□ -1.56
USP48-215ENST00000534705 H7BY64 318 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 ARNTLO00327 626 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 PPP1R11O60927 126 aaPredicted RBP5.31□□□□□ -1.56
USP48-215ENST00000534705 C8BP07358 591 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 SSRP1Q08945 709 aaKnown RBP5.31□□□□□ -1.56
USP48-215ENST00000534705 KLF10Q13118 480 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 PRSS53Q2L4Q9 553 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 NSMFQ6X4W1 530 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 ETV3LQ6ZN32 361 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 SPATC1Q76KD6 591 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 DNERQ8NFT8 737 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 USP33Q8TEY7 942 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 OSBPL2Q9H1P3 480 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 C11orf21Q9P2W6 132 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 TMEFF2Q9UIK5 374 aaPredicted RBP5.31□□□□□ -1.56
USP48-215ENST00000534705 TESMINQ9Y4I5 508 aa5.31□□□□□ -1.56
USP48-215ENST00000534705 DDX3XO00571 662 aaKnown RBP eCLIP5.3□□□□□ -1.56
USP48-215ENST00000534705 PRODHO43272 600 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 SELENOPP49908 381 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 NFE2L2Q16236 605 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 ZNF585AQ6P3V2 769 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 ZC3H18Q86VM9 953 aaKnown RBP5.3□□□□□ -1.56
USP48-215ENST00000534705 NLRP10Q86W26 655 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 JMYQ8N9B5 988 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 ZBTB38Q8NAP3 1195 aaPredicted RBP5.3□□□□□ -1.56
USP48-215ENST00000534705 RCBTB1Q8NDN9 531 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 DCAF4Q8WV16 495 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 SEC14L1Q92503 715 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 AP5M1Q9H0R1 490 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 MARCH2Q9P0N8 246 aa5.3□□□□□ -1.56
USP48-215ENST00000534705 MUSKO15146 869 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 B4GALT3O60512 393 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 FUCA1P04066 466 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 SUMO1P63165 101 aaKnown RBP5.29□□□□□ -1.56
USP48-215ENST00000534705 LSAMPQ13449 338 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 CHRNA2Q15822 529 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 SMN1Q16637 294 aaKnown RBP5.29□□□□□ -1.56
USP48-215ENST00000534705 PRR31Q5SQ13 230 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 STYK1Q6J9G0 422 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 SCUBE1Q8IWY4 988 aa5.29□□□□□ -1.56
USP48-215ENST00000534705 PALM2Q8IXS6 379 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms