RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 MRPS23Q9Y3D9 190 aaKnown RBP3.75□□□□□ -1.81
CSDE1-216ENST00000534389 CEP83Q9Y592 693 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 ABCC5O15440 1437 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 SAMD9Q5K651 1589 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 LAMC3Q9Y6N6 1575 aa3.75□□□□□ -1.81
CSDE1-216ENST00000534389 PTPRCP08575 1304 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 BLACEA4D250 179 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 WTIPA6NIX2 430 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 MYO1CO00159 1063 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PLXNC1O60486 1568 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 CCDC172P0C7W6 258 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 HSP90B1P14625 803 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 H2AFXP16104 143 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 NAT1P18440 290 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PTGS1P23219 599 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GRIA2P42262 883 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GP2P55259 537 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GFRA1P56159 465 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GSCP56915 257 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 RPL11P62913 178 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 NUCB2P80303 420 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 SATB1Q01826 763 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 NUCB1Q02818 461 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 MAP4K2Q12851 820 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 LRMPQ12912 555 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 KCNAB2Q13303 367 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 HDAC1Q13547 482 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 SART3Q15020 963 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 SF1Q15637 639 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 YOD1Q5VVQ6 348 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 RCSD1Q6JBY9 416 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GALNT18Q6P9A2 607 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 ZPBP2Q6X784 338 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 C16orf86Q6ZW13 317 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 CREBRFQ8IUR6 639 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 C10orf67Q8IYJ2 551 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PDZD8Q8NEN9 1154 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 NUP43Q8NFH3 380 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 MYLIPQ8WY64 445 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 GTF3C6Q969F1 213 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 MAP6Q96JE9 813 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 RNPC3Q96LT9 517 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 NOL10Q9BSC4 688 aaKnown RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 FUCA2Q9BTY2 467 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PAK6Q9NQU5 681 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 TOMM22Q9NS69 142 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 SFMBT1Q9UHJ3 866 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 COA3Q9Y2R0 106 aaPredicted RBP3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PCDHA2Q9Y5H9 948 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 ROCK1Q13464 1354 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 ANKRD30AQ9BXX3 1397 aa3.74□□□□□ -1.81
CSDE1-216ENST00000534389 PLB1Q6P1J6 1458 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ANKRD50Q9ULJ7 1429 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 TMEM82A0PJX8 343 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 AQP7O14520 342 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 FGF10O15520 208 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 DLX3O60479 287 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ADAMTS4O75173 837 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 HSD3B2P26439 372 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 FLT3P36888 993 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 LTBRP36941 435 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 KIR2DL1P43626 348 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 KIR2DL2P43627 348 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 AFMP43652 599 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 INHBEP58166 350 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 GABREP78334 506 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 GUCY1A3Q02108 690 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 MVPQ14764 893 aaKnown RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 WDR43Q15061 677 aaKnown RBP eCLIP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 C21orf62-AS1Q17RA5 79 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF792Q3KQV3 632 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 RNF187Q5TA31 235 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 E4F1Q66K89 784 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 BICRALQ6AI39 1079 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 MPZL3Q6UWV2 235 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ZC3H7AQ8IWR0 971 aaKnown RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 SIRT2Q8IXJ6 389 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 SYNPOQ8N3V7 929 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 GPATCH11Q8N954 259 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 DCAF4Q8WV16 495 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 PTPRN2Q92932 1015 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 TRMT2BQ96GJ1 504 aaKnown RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 MAGEB10Q96LZ2 347 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 PHF20Q9BVI0 1012 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ERVK13-1Q9NX77 482 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF215Q9UL58 517 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 JRKLQ9Y4A0 524 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 V9GYY5 206 aaPredicted RBP3.73□□□□□ -1.81
CSDE1-216ENST00000534389 AK9Q5TCS8 1911 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ANKRD36BQ8N2N9 1353 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 PLEKHG2Q9H7P9 1386 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ATAD2BQ9ULI0 1458 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 WDR7Q9Y4E6 1490 aa3.73□□□□□ -1.81
CSDE1-216ENST00000534389 ZNF644Q9H582 1327 aaPredicted RBP3.72□□□□□ -1.81
CSDE1-216ENST00000534389 PIK3C2GO75747 1445 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 DAPK1P53355 1430 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 ERBINQ96RT1 1412 aa3.72□□□□□ -1.81
CSDE1-216ENST00000534389 EHBP1L1Q8N3D4 1523 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms