RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 ZFP91Q96JP5 570 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 UBE2ZQ9H832 354 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 SUGCTQ9HAC7 445 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 MAD2L2Q9UI95 211 aa18.21■□□□□ 0.51
CHMP4A-207ENST00000533523 WDR87Q6ZQQ6 2873 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 C17orf102A2RUQ5 167 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 AMHP03971 560 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 IL9P15248 144 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 NHLH1Q02575 133 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 HIC1Q14526 733 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 SEC23AQ15436 765 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 STOX1Q6ZVD7 989 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 CYB5R4Q7L1T6 521 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 SERINC5Q86VE9 423 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 FCHSD1Q86WN1 690 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 FAM178BQ8IXR5 827 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 GPKOWQ92917 476 aaPredicted RBP eCLIP18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 MTMR8Q96EF0 704 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 MLXIPQ9HAP2 919 aa18.2■□□□□ 0.5
CHMP4A-207ENST00000533523 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 RSPH10B2B2RC85 870 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 GCOM1H8Y6P7 765 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 PPFIA4O75335 1185 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 CTSHP09668 335 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 RSPH10BP0C881 870 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 POLR2MP0CAP2 368 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 SP2Q02086 613 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 VSIG10LQ86VR7 867 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 ATP6V0A1Q93050 837 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 C17orf80Q9BSJ5 609 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 IL25Q9H293 177 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 MAP3K20Q9NYL2 800 aaKnown RBP18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 INSL6Q9Y581 213 aa18.19■□□□□ 0.5
CHMP4A-207ENST00000533523 TECTAO75443 2155 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 SPTBN4Q9H254 2564 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 PRR33A8MZF0 331 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 NOP56O00567 594 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 SGSM2O43147 1006 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 LGALS2P05162 132 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 SMIM10L2AP0DMW4 78 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 SMIM10L2BP0DMW5 78 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 TRDNQ13061 729 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 DBF4BQ8NFT6 615 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 PIGSQ96S52 555 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 PHOX2BQ99453 314 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 C16orf70Q9BSU1 422 aa18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-207ENST00000533523 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 PALM3A6NDB9 673 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 TGFB3P10600 412 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 KCNA5P22460 613 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 GRM4Q14833 912 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 SLC35G1Q2M3R5 365 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 GNPTABQ3T906 1256 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 SAMD3Q8N6K7 520 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 YME1L1Q96TA2 773 aa18.17■□□□□ 0.5
CHMP4A-207ENST00000533523 COL4A6Q14031 1691 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 H3BRB1 525 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 TREHO43280 583 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 TRAF1Q13077 416 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 PLEKHG4Q58EX7 1191 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 PIBF1Q8WXW3 757 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 SEPT8Q92599 483 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 SNX27Q96L92 541 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 FBXL18Q96ME1 805 aa18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 TUT1Q9H6E5 874 aaKnown RBP18.16■□□□□ 0.5
CHMP4A-207ENST00000533523 ERICH2A1L162 156 aa18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 IFIT3O14879 490 aaKnown RBP18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 HTRA4P83105 476 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 MKRN4PQ13434 485 aaPredicted RBP18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 TRIM50Q86XT4 487 aa18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 BCAS3Q9H6U6 928 aa18.15■□□□□ 0.5
CHMP4A-207ENST00000533523 KMT2EQ8IZD2 1858 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 CDC45O75419 566 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 UPP2O95045 317 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 HOXC8P31273 242 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 SP4Q02446 784 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 WTAPQ15007 396 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 PTPROQ16827 1216 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 LEXMQ3ZCV2 418 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 C8orf34Q49A92 452 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 EPC2Q52LR7 807 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 TIGD5Q53EQ6 642 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 CYFIP1Q7L576 1253 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 RALYLQ86SE5 291 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 GJD3Q8N144 294 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 SP7Q8TDD2 431 aaPredicted RBP18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 MRPL38Q96DV4 380 aaKnown RBP18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 RIOX1Q9H6W3 641 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 SENP2Q9HC62 589 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 ZNF215Q9UL58 517 aaPredicted RBP18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 FRMPD4Q14CM0 1322 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 KIAA1671Q9BY89 1806 aa18.14■□□□□ 0.49
CHMP4A-207ENST00000533523 PNMA6FA0A0J9YX94 578 aa18.13■□□□□ 0.49
CHMP4A-207ENST00000533523 CYTH3O43739 400 aa18.13■□□□□ 0.49
CHMP4A-207ENST00000533523 CAND2O75155 1236 aa18.13■□□□□ 0.49
CHMP4A-207ENST00000533523 SSTR3P32745 418 aaPredicted RBP18.13■□□□□ 0.49
CHMP4A-207ENST00000533523 MRPS9P82933 396 aaKnown RBP18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms