RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 CYP3A7P24462 503 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 ITGB3BPQ13352 177 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-214ENST00000533209 SNX17Q15036 470 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 GIMAP8Q8ND71 665 aaPredicted RBP13.63□□□□□ -0.23
SSBP3-214ENST00000533209 GLT1D1Q96MS3 346 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 MBOAT7Q96N66 472 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 AGO4Q9HCK5 861 aaKnown RBP13.63□□□□□ -0.23
SSBP3-214ENST00000533209 STARD7Q9NQZ5 370 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 PKD2L1Q9P0L9 805 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 SMC3Q9UQE7 1217 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 KIF3AQ9Y496 699 aa13.63□□□□□ -0.23
SSBP3-214ENST00000533209 A0A0U1RQG5 324 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-214ENST00000533209 TDP2O95551 362 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 RTP1P59025 263 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 SETQ01105 290 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-214ENST00000533209 SAFBQ15424 915 aaKnown RBP eCLIP13.62□□□□□ -0.23
SSBP3-214ENST00000533209 DGKDQ16760 1214 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 PRR16Q569H4 304 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 C1orf53Q5VUE5 145 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 MOXD1Q6UVY6 613 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 NEK8Q86SG6 692 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 SLC43A3Q8NBI5 491 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 KAT2BQ92831 832 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 VTI1AQ96AJ9 217 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 GPR20Q99678 358 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 MTG1Q9BT17 334 aaPredicted RBP13.62□□□□□ -0.23
SSBP3-214ENST00000533209 GRIN2DO15399 1336 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 NFASCO94856 1347 aa13.62□□□□□ -0.23
SSBP3-214ENST00000533209 MYH7BA7E2Y1 1941 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 IPO5O00410 1097 aaKnown RBP13.61□□□□□ -0.23
SSBP3-214ENST00000533209 NOP56O00567 594 aaKnown RBP13.61□□□□□ -0.23
SSBP3-214ENST00000533209 DHX15O43143 795 aaKnown RBP13.61□□□□□ -0.23
SSBP3-214ENST00000533209 PPFIA4O75335 1185 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 CDK7P50613 346 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 PSMC6P62333 389 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 SP4Q02446 784 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 ITGA7Q13683 1181 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 LETM2Q2VYF4 491 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 TRIM60Q495X7 471 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 Q4G0T1 1027 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 DPF3Q92784 378 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 INTS4Q96HW7 963 aaKnown RBP13.61□□□□□ -0.23
SSBP3-214ENST00000533209 UIMC1Q96RL1 719 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 ZNF577Q9BSK1 485 aa13.61□□□□□ -0.23
SSBP3-214ENST00000533209 FOXP1Q9H334 677 aaPredicted RBP13.61□□□□□ -0.23
SSBP3-214ENST00000533209 GSTTP1A0A1W2PQM5 241 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 KIF28PB7ZC32 967 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 ARVCFO00192 962 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 MSH4O15457 936 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 EVI5O60447 810 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 ZNF286BP0CG31 522 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 GCFC2P16383 781 aaKnown RBP13.6□□□□□ -0.23
SSBP3-214ENST00000533209 PPP4R3AQ6IN85 833 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 HSCBQ8IWL3 235 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 SDF4Q9BRK5 362 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 C16orf70Q9BSU1 422 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 JPH1Q9HDC5 661 aaPredicted RBP13.6□□□□□ -0.23
SSBP3-214ENST00000533209 SLC9A2Q9UBY0 812 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 ATP11BQ9Y2G3 1177 aa13.6□□□□□ -0.23
SSBP3-214ENST00000533209 HAS3O00219 553 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 WNT7AO00755 349 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 SLC37A4O43826 429 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 CCNE2O96020 404 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 F2P00734 622 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 LGALS2P05162 132 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 U2AF2P26368 475 aaKnown RBP eCLIP13.59□□□□□ -0.23
SSBP3-214ENST00000533209 TLE2Q04725 743 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 NBPF20Q3BBV1 942 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 LARP1BQ659C4 914 aaKnown RBP13.59□□□□□ -0.23
SSBP3-214ENST00000533209 ANKRD33Q7Z3H0 272 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 NOSTRINQ8IVI9 506 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 C7orf61Q8IZ16 206 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 ETNPPLQ8TBG4 499 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 SLC5A5Q92911 643 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 NAP1L4Q99733 375 aaKnown RBP13.59□□□□□ -0.23
SSBP3-214ENST00000533209 SEZ6LQ9BYH1 1024 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 TBC1D22BQ9NU19 505 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 DDX25Q9UHL0 483 aaKnown RBP13.59□□□□□ -0.23
SSBP3-214ENST00000533209 PDE4DIPQ5VU43 2346 aa13.59□□□□□ -0.23
SSBP3-214ENST00000533209 DDX39AO00148 427 aaKnown RBP13.58□□□□□ -0.24
SSBP3-214ENST00000533209 CCNT1O60563 726 aaKnown RBP13.58□□□□□ -0.24
SSBP3-214ENST00000533209 PQBP1O60828 265 aaKnown RBP13.58□□□□□ -0.24
SSBP3-214ENST00000533209 ATG7O95352 703 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 TCF7P36402 384 aaPredicted RBP13.58□□□□□ -0.24
SSBP3-214ENST00000533209 PSEN2P49810 448 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 ACTR2P61160 394 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 MFSD10Q14728 455 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 UTP14CQ5TAP6 766 aaKnown RBP13.58□□□□□ -0.24
SSBP3-214ENST00000533209 TRIM50Q86XT4 487 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 PPP1R13LQ8WUF5 828 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 GJA10Q969M2 543 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 TOX2Q96NM4 488 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 PCYT2Q99447 389 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 RIT2Q99578 217 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 FOXD4L1Q9NU39 408 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 ALPK3Q96L96 1907 aa13.58□□□□□ -0.24
SSBP3-214ENST00000533209 H3BQV1 296 aa13.57□□□□□ -0.24
SSBP3-214ENST00000533209 H3BRB1 525 aa13.57□□□□□ -0.24
SSBP3-214ENST00000533209 LGR5O75473 907 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms