RNA–Protein interactions for RNA: ENST00000532881.5

SSH3-210, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 1 (best)

Gene SSH3, Length 2,587 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-210ENST00000532881 CYP4A11Q02928 519 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 GPS2Q13227 327 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 HSP90B2PQ58FF3 399 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 ARSHQ5FYA8 562 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 PDXDC1Q6P996 788 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 SLF2Q8IX21 1173 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 SCFD1Q8WVM8 642 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
SSH3-210ENST00000532881 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.47■□□□□ 0.23
SSH3-210ENST00000532881 IRX5P78411 483 aaPredicted RBP16.47■□□□□ 0.23
SSH3-210ENST00000532881 PABPC4Q13310 644 aaKnown RBP eCLIP16.47■□□□□ 0.23
SSH3-210ENST00000532881 ZCWPW2Q504Y3 356 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 PRR16Q569H4 304 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 FIGNQ5HY92 759 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 CCNI2Q6ZMN8 369 aaPredicted RBP16.47■□□□□ 0.23
SSH3-210ENST00000532881 FAM133AQ8N9E0 248 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 RAB34Q9BZG1 259 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 COL4A3BPQ9Y5P4 624 aa16.47■□□□□ 0.23
SSH3-210ENST00000532881 ESYT3A0FGR9 886 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 SFI1A8K8P3 1242 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 AGPSO00116 658 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 USO1O60763 962 aaKnown RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 TACC1O75410 805 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 POLD1P28340 1107 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 HOXA13P31271 388 aaPredicted RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 JAG1P78504 1218 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 FAM83BQ5T0W9 1011 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 PPP4R3AQ6IN85 833 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 SPATA4Q8NEY3 305 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 RSPH10B2B2RC85 870 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 TRIM66O15016 1216 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 RSPH10BP0C881 870 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 HNRNPH3P31942 346 aaKnown RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 LRRC63Q05C16 580 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 KCNA1Q09470 495 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 RAPGEF1Q13905 1077 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 SEPT2Q15019 361 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 TRADDQ15628 312 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 ASTE1Q2TB18 679 aaPredicted RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 SAMD1Q6SPF0 538 aaPredicted RBP16.46■□□□□ 0.23
SSH3-210ENST00000532881 SPICE1Q8N0Z3 855 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 EHBP1Q8NDI1 1231 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 TBC1D5Q92609 795 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 TLR10Q9BXR5 811 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 JRKLQ9Y4A0 524 aa16.46■□□□□ 0.23
SSH3-210ENST00000532881 G3V3G9 751 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 KRT18P05783 430 aaKnown RBP16.45■□□□□ 0.22
SSH3-210ENST00000532881 CYP11B2P19099 503 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 MRPL12P52815 198 aaKnown RBP16.45■□□□□ 0.22
SSH3-210ENST00000532881 FKBP3Q00688 224 aaKnown RBP16.45■□□□□ 0.22
SSH3-210ENST00000532881 DCAF8Q5TAQ9 597 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 KLHDC7AQ5VTJ3 777 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 TTC19Q6DKK2 380 aaPredicted RBP16.45■□□□□ 0.22
SSH3-210ENST00000532881 TRIM58Q8NG06 486 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 TSG101Q99816 390 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 GBP3Q9H0R5 595 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 RBM12Q9NTZ6 932 aaKnown RBP16.45■□□□□ 0.22
SSH3-210ENST00000532881 PCDHA2Q9Y5H9 948 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 KLRC1P26715 233 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 CDK17Q00537 523 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 COBLL1Q53SF7 1204 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 ZNF662Q6ZS27 426 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
SSH3-210ENST00000532881 SIAH1Q8IUQ4 282 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 EHD4Q9H223 541 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 SMCHD1A6NHR9 2005 aa16.45■□□□□ 0.22
SSH3-210ENST00000532881 NHSQ6T4R5 1651 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 A0A087X0T9 212 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 ZBTB39O15060 712 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 FAM228BP0C875 321 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 SLC9A1P19634 815 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 IKQ13123 557 aaPredicted RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 ADAM9Q13443 819 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 CDC37Q16543 378 aaPredicted RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 MEX3CQ5U5Q3 659 aaKnown RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 SH3BP5LQ7L8J4 393 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 CCDC84Q86UT8 332 aaPredicted RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 CATSPER3Q86XQ3 398 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 ANO3Q9BYT9 981 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 EMILIN3Q9NT22 766 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 ATF5Q9Y2D1 282 aaPredicted RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 ANO9A1A5B4 782 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 MEIS2O14770 477 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 PRPF6O94906 941 aaKnown RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 HOXA10P31260 410 aaPredicted RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 ACTN2P35609 894 aa16.44■□□□□ 0.22
SSH3-210ENST00000532881 DNAJC21Q5F1R6 531 aaKnown RBP16.44■□□□□ 0.22
SSH3-210ENST00000532881 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.44■□□□□ 0.22
SSH3-210ENST00000532881 FAM86B1E9PN63 330 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 PALMO75781 387 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 FAM86B2P0C5J1 330 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 KSR1Q8IVT5 923 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 PROM2Q8N271 834 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 FAM71BQ8TC56 605 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
SSH3-210ENST00000532881 PLIN4Q96Q06 1357 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms