RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 PCDHA1Q9Y5I3 950 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 NEDD4P46934 1319 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 CCDC171Q6TFL3 1326 aa10.74□□□□□ -0.69
NEDD8-206ENST00000531430 KLRF2D3W0D1 207 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-206ENST00000531430 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 GNAT1P11488 350 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 IBSPP21815 317 aaPredicted RBP10.73□□□□□ -0.69
NEDD8-206ENST00000531430 CWC27Q6UX04 472 aaKnown RBP10.73□□□□□ -0.69
NEDD8-206ENST00000531430 RPAINQ86UA6 219 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 VSIG10LQ86VR7 867 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 STAG2Q8N3U4 1231 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 MFSD14AQ96MC6 490 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 PDCD2LQ9BRP1 358 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 UBAC1Q9BSL1 405 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 C16orf70Q9BSU1 422 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 MUTYHQ9UIF7 546 aa10.73□□□□□ -0.69
NEDD8-206ENST00000531430 POTEB3A0JP26 581 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 RGS20O76081 388 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 SDSP20132 328 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 UBA1P22314 1058 aaKnown RBP10.72□□□□□ -0.69
NEDD8-206ENST00000531430 CCND2P30279 289 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 IRS1P35568 1242 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 ARHGAP4P98171 946 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 ZP2Q05996 745 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 PGM5Q15124 567 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 IFIT1BQ5T764 474 aaKnown RBP10.72□□□□□ -0.69
NEDD8-206ENST00000531430 POTEBQ6S5H4 581 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 HFE2Q6ZVN8 426 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 CYFIP1Q7L576 1253 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 ADHFE1Q8IWW8 467 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 ENAHQ8N8S7 591 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-206ENST00000531430 IL31RAQ8NI17 732 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 SP7Q8TDD2 431 aaPredicted RBP10.72□□□□□ -0.69
NEDD8-206ENST00000531430 LNPKQ9C0E8 428 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 MAF1Q9H063 256 aa10.72□□□□□ -0.69
NEDD8-206ENST00000531430 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 STXBP3O00186 592 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 GRM6O15303 877 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 NCK2O43639 380 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 LGALS2P05162 132 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 TGFB3P10600 412 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 SIP14410 1827 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 GTF2F1P35269 517 aaKnown RBP eCLIP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 HSD17B4P51659 736 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 DLX2Q07687 328 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 BTG3Q14201 252 aaPredicted RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 IMMTQ16891 758 aaKnown RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 KIAA1217Q5T5P2 1943 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 STOX1Q6ZVD7 989 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 USP26Q9BXU7 913 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 ALG13Q9NP73 1137 aaKnown RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 DIAPH3Q9NSV4 1193 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 PRKAG3Q9UGI9 489 aa10.71□□□□□ -0.69
NEDD8-206ENST00000531430 SUPT16HQ9Y5B9 1047 aaKnown RBP10.71□□□□□ -0.69
NEDD8-206ENST00000531430 SALL3Q9BXA9 1300 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 ZBTB5O15062 677 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 PPP1R11O60927 126 aaPredicted RBP10.7□□□□□ -0.7
NEDD8-206ENST00000531430 PPFIA3O75145 1194 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 RB1P06400 928 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 GHRP10912 638 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 BMPR1AP36894 532 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 LTBRP36941 435 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 NDUFV1P49821 464 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 HYAL1Q12794 435 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 GNPTABQ3T906 1256 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 RNF135Q8IUD6 432 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 PBXIP1Q96AQ6 731 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 PIGSQ96S52 555 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 POP1Q99575 1024 aaKnown RBP10.7□□□□□ -0.7
NEDD8-206ENST00000531430 KRT23Q9C075 422 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 MYH6P13533 1939 aa10.7□□□□□ -0.7
NEDD8-206ENST00000531430 MICAL3Q7RTP6 2002 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 ZMYM6O95789 1325 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 C19orf67A6NJJ6 358 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 ENPP3O14638 875 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 OPLAHO14841 1288 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 LINC01565O15544 149 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 MBTPS2O43462 519 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 MKRN4PQ13434 485 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-206ENST00000531430 NEDD9Q14511 834 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 RBM23Q86U06 439 aaKnown RBP10.69□□□□□ -0.7
NEDD8-206ENST00000531430 TRIM50Q86XT4 487 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 MICAL1Q8TDZ2 1067 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 APBB2Q92870 758 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 C11orf84Q9BUA3 381 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-206ENST00000531430 MAP3K20Q9NYL2 800 aaKnown RBP10.69□□□□□ -0.7
NEDD8-206ENST00000531430 CD207Q9UJ71 328 aa10.69□□□□□ -0.7
NEDD8-206ENST00000531430 ZNF215Q9UL58 517 aaPredicted RBP10.69□□□□□ -0.7
NEDD8-206ENST00000531430 CHRNA1P02708 482 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 HOXD8P13378 290 aaPredicted RBP10.68□□□□□ -0.7
NEDD8-206ENST00000531430 MARK3P27448 753 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 IGBP1P78318 339 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 TRAF1Q13077 416 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 PAN2Q504Q3 1202 aaKnown RBP10.68□□□□□ -0.7
NEDD8-206ENST00000531430 SPOUT1Q5T280 376 aaKnown RBP10.68□□□□□ -0.7
NEDD8-206ENST00000531430 RSPH3Q86UC2 560 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 SMARCC2Q8TAQ2 1214 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 DNAJB3Q8WWF6 145 aa10.68□□□□□ -0.7
NEDD8-206ENST00000531430 PHOX2BQ99453 314 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms