RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 MTMR9Q96QG7 549 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 RIT2Q99578 217 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 SDF4Q9BRK5 362 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 CHMP5Q9NZZ3 219 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 ATP6V1DQ9Y5K8 247 aa19.16■□□□□ 0.66
SF3B2-211ENST00000531041 LAD1O00515 517 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 FARP2O94887 1054 aaPredicted RBP19.15■□□□□ 0.66
SF3B2-211ENST00000531041 BAG4O95429 457 aaKnown RBP19.15■□□□□ 0.66
SF3B2-211ENST00000531041 BMP15O95972 392 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 PTGDRQ13258 359 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 ATL3Q6DD88 541 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 CYFIP1Q7L576 1253 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 ZNF396Q96N95 335 aaPredicted RBP19.15■□□□□ 0.66
SF3B2-211ENST00000531041 UPF3AQ9H1J1 476 aaKnown RBP19.15■□□□□ 0.66
SF3B2-211ENST00000531041 TMEM60Q9H2L4 133 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 BCAS3Q9H6U6 928 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 MLXIPQ9HAP2 919 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 PKD2L1Q9P0L9 805 aa19.15■□□□□ 0.66
SF3B2-211ENST00000531041 KIAA0100Q14667 2235 aaKnown RBP19.14■□□□□ 0.66
SF3B2-211ENST00000531041 SYNRGQ9UMZ2 1314 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 POTEFA5A3E0 1075 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 DYNC1LI2O43237 492 aaPredicted RBP19.14■□□□□ 0.65
SF3B2-211ENST00000531041 PSMD10O75832 226 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 GJB1P08034 283 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 PTGS1P23219 599 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 GJA9P57773 515 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 SF3A1Q15459 793 aaKnown RBP19.14■□□□□ 0.65
SF3B2-211ENST00000531041 LRCH2Q5VUJ6 765 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 OR6J1Q8NGC5 347 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 DEFB118Q96PH6 123 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 UIMC1Q96RL1 719 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 AP5M1Q9H0R1 490 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 XPNPEP3Q9NQH7 507 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 CEP131Q9UPN4 1083 aa19.14■□□□□ 0.65
SF3B2-211ENST00000531041 MARCH6O60337 910 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 GAS7O60861 476 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 OR52Z1P0C646 297 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 ATP2C1P98194 919 aaPredicted RBP19.13■□□□□ 0.65
SF3B2-211ENST00000531041 GJA10Q969M2 543 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 USP28Q96RU2 1077 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 SPC25Q9HBM1 224 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 JPH1Q9HDC5 661 aaPredicted RBP19.13■□□□□ 0.65
SF3B2-211ENST00000531041 POLR3EQ9NVU0 708 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 SLC9A2Q9UBY0 812 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 CLIC4Q9Y696 253 aa19.13■□□□□ 0.65
SF3B2-211ENST00000531041 A6NJR5 290 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 ADAMTS4O75173 837 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 SGPL1O95470 568 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 PRPHP41219 470 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 HSDL1Q3SXM5 330 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 PPTC7Q8NI37 304 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 SPATA33Q96N06 139 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 TEKT3Q9BXF9 490 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 FTOQ9C0B1 505 aaKnown RBP eCLIP19.12■□□□□ 0.65
SF3B2-211ENST00000531041 CRISPLD2Q9H0B8 497 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 OGDHLQ9ULD0 1010 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 PCDHA12Q9UN75 941 aa19.12■□□□□ 0.65
SF3B2-211ENST00000531041 CTAGE5O15320 804 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 SORBS3O60504 671 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 PGK1P00558 417 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 C6orf222P0C671 652 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 CAPN2P17655 700 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 NASPP49321 788 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 CPT1AP50416 773 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 KRT76Q01546 638 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 DNM1Q05193 864 aaKnown RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 PTPAQ15257 358 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 ARL6IP4Q66PJ3 421 aaKnown RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 ZNF746Q6NUN9 644 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 B3GNT9Q6UX72 402 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 KLHDC9Q8NEP7 349 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 TMEM106CQ9BVX2 250 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 TTC12Q9H892 705 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 TFIP11Q9UBB9 837 aaKnown RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 VAV3Q9UKW4 847 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 CFAP45Q9UL16 551 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 MORC2Q9Y6X9 1032 aaPredicted RBP19.11■□□□□ 0.65
SF3B2-211ENST00000531041 KAT6AQ92794 2004 aa19.11■□□□□ 0.65
SF3B2-211ENST00000531041 DDX39AO00148 427 aaKnown RBP19.1■□□□□ 0.65
SF3B2-211ENST00000531041 CST5P28325 142 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-211ENST00000531041 TXKP42681 527 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 GJA8P48165 433 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 PPP2R5CQ13362 524 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 FSCN1Q16658 493 aaKnown RBP19.1■□□□□ 0.65
SF3B2-211ENST00000531041 BRDTQ58F21 947 aaPredicted RBP19.1■□□□□ 0.65
SF3B2-211ENST00000531041 RNF180Q86T96 592 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 ARRDC4Q8NCT1 418 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 U2AF1L4Q8WU68 220 aaKnown RBP19.1■□□□□ 0.65
SF3B2-211ENST00000531041 AFG1LQ8WV93 481 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 GPR20Q99678 358 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 TCEAL9Q9UHQ7 104 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 ELP1O95163 1332 aa19.1■□□□□ 0.65
SF3B2-211ENST00000531041 NOP56O00567 594 aaKnown RBP19.09■□□□□ 0.65
SF3B2-211ENST00000531041 PPFIA4O75335 1185 aa19.09■□□□□ 0.65
SF3B2-211ENST00000531041 ATG7O95352 703 aa19.09■□□□□ 0.65
SF3B2-211ENST00000531041 YEATS4O95619 227 aa19.09■□□□□ 0.65
SF3B2-211ENST00000531041 CCNE2O96020 404 aa19.09■□□□□ 0.65
SF3B2-211ENST00000531041 HOXD8P13378 290 aaPredicted RBP19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms