RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 NFXL1Q6ZNB6 911 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 CYFIP1Q7L576 1253 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 TRIM50Q86XT4 487 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 RRP36Q96EU6 259 aaKnown RBP18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 MYL10Q9BUA6 226 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 RTEL1Q9NZ71 1219 aa18.26■□□□□ 0.51
CHMP4A-204ENST00000530996 PRRC2BQ5JSZ5 2229 aaKnown RBP18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 FIBPO43427 364 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 LPXNO60711 386 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 STAM2O75886 525 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 KIF5BP33176 963 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 TROAPQ12815 778 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 NEDD9Q14511 834 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 METTL7BQ6UX53 244 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 FBXO22Q8NEZ5 403 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 DBF4BQ8NFT6 615 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 SEPT8Q92599 483 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 YME1L1Q96TA2 773 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 RAPGEFL1Q9UHV5 662 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 TET1Q8NFU7 2136 aa18.25■□□□□ 0.51
CHMP4A-204ENST00000530996 FRMPD4Q14CM0 1322 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 TREHO43280 583 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 DDAH1O94760 285 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 GNAT1P11488 350 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 ERVK-21P61565 698 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 ZNF654Q8IZM8 581 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 INPP4AQ96PE3 977 aaPredicted RBP18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 USP26Q9BXU7 913 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 INSL6Q9Y581 213 aa18.24■□□□□ 0.51
CHMP4A-204ENST00000530996 SGSM2O43147 1006 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 ANTXR2P58335 489 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 IRX6P78412 446 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 MRPS9P82933 396 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 ARHGAP4P98171 946 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 USP17L6PQ6QN14 398 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 MB21D2Q8IYB1 491 aaPredicted RBP18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 GPR20Q99678 358 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 C17orf80Q9BSJ5 609 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 C1QTNF1Q9BXJ1 281 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 BCAS3Q9H6U6 928 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 SUGCTQ9HAC7 445 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 SETD4Q9NVD3 440 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 LMCD1Q9NZU5 365 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 SUPT16HQ9Y5B9 1047 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 RBM8AQ9Y5S9 174 aaKnown RBP18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 TRANK1O15050 2925 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 REV3LO60673 3130 aa18.23■□□□□ 0.51
CHMP4A-204ENST00000530996 PTPRSQ13332 1948 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 CCDC69A6NI79 296 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 CAND2O75155 1236 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 UPP2O95045 317 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 NLRX1Q86UT6 975 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 SPZ1Q9BXG8 430 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 RNPEPQ9H4A4 650 aa18.22■□□□□ 0.51
CHMP4A-204ENST00000530996 SPATA31C2B4DYI2 1134 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 PRC1O43663 620 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 ICAM3P32942 547 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 SEMA3FQ13275 785 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 PLEKHG4Q58EX7 1191 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 PCNX4Q63HM2 1172 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 LMBR1Q8WVP7 490 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 IFIH1Q9BYX4 1025 aaKnown RBP18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 UBE2ZQ9H832 354 aaPredicted RBP18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 LY9Q9HBG7 655 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 PKD2L1Q9P0L9 805 aa18.21■□□□□ 0.51
CHMP4A-204ENST00000530996 TRIP12Q14669 1992 aaPredicted RBP18.21■□□□□ 0.5
CHMP4A-204ENST00000530996 PLEKHA8P1O95397 391 aa18.2■□□□□ 0.5
CHMP4A-204ENST00000530996 RXRAP19793 462 aa18.2■□□□□ 0.5
CHMP4A-204ENST00000530996 HOXC8P31273 242 aa18.2■□□□□ 0.5
CHMP4A-204ENST00000530996 PTPROQ16827 1216 aa18.2■□□□□ 0.5
CHMP4A-204ENST00000530996 IGDCC4Q8TDY8 1250 aa18.2■□□□□ 0.5
CHMP4A-204ENST00000530996 KCNA5P22460 613 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 MARK3P27448 753 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 GNAQP50148 359 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 XRRA1Q6P2D8 792 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 EP400NLQ6ZTU2 488 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 RAB11FIP4Q86YS3 637 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 GIMAP8Q8ND71 665 aaPredicted RBP18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 LZTS2Q9BRK4 669 aa18.19■□□□□ 0.5
CHMP4A-204ENST00000530996 GHRP10912 638 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 MCM5P33992 734 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 TCF7P36402 384 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 HTRA4P83105 476 aaPredicted RBP18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 PPFIA1Q13136 1202 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 UBE2SQ16763 222 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 EPC2Q52LR7 807 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 TIGD5Q53EQ6 642 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 CMTR1Q8N1G2 835 aaKnown RBP18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 APBB2Q92870 758 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 MAP4K1Q92918 833 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 SAMD11Q96NU1 681 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 MAP3K14Q99558 947 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 PSTPIP2Q9H939 334 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 TELO2Q9Y4R8 837 aa18.18■□□□□ 0.5
CHMP4A-204ENST00000530996 TCF20Q9UGU0 1960 aaKnown RBP18.17■□□□□ 0.5
CHMP4A-204ENST00000530996 SPDYE3A6NKU9 549 aa18.17■□□□□ 0.5
CHMP4A-204ENST00000530996 PIK3CDO00329 1044 aa18.17■□□□□ 0.5
CHMP4A-204ENST00000530996 SH2B2O14492 632 aaPredicted RBP18.17■□□□□ 0.5
CHMP4A-204ENST00000530996 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms