RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 NECAB2Q7Z6G3 386 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 NEK8Q86SG6 692 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 PLA2G4DQ86XP0 818 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 CYP2W1Q8TAV3 490 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 COPS5Q92905 334 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 MLXIPQ9HAP2 919 aa17.38■□□□□ 0.37
CCS-206ENST00000530961 IGLV3-22A0A075B6J6 115 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 A6NJR5 290 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 EDIL3O43854 480 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 GGPS1O95749 300 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 GCFC2P16383 781 aaKnown RBP17.37■□□□□ 0.37
CCS-206ENST00000530961 GNL2Q13823 731 aaKnown RBP17.37■□□□□ 0.37
CCS-206ENST00000530961 PRR16Q569H4 304 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 PPP4R3AQ6IN85 833 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 RAPGEFL1Q9UHV5 662 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 PHF24Q9UPV7 400 aa17.37■□□□□ 0.37
CCS-206ENST00000530961 MYADML2A6NDP7 307 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 CABYRO75952 493 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 ARP10275 920 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 COL6A1P12109 1028 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 PDIA4P13667 645 aaKnown RBP17.36■□□□□ 0.37
CCS-206ENST00000530961 KCNA2P16389 499 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 U2AF2P26368 475 aaKnown RBP eCLIP17.36■□□□□ 0.37
CCS-206ENST00000530961 BECN1Q14457 450 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 KCNA10Q16322 511 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 Q4G0T1 1027 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 EARS2Q5JPH6 523 aaKnown RBP17.36■□□□□ 0.37
CCS-206ENST00000530961 PPTC7Q8NI37 304 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 AFG1LQ8WV93 481 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 PAWRQ96IZ0 340 aaKnown RBP17.36■□□□□ 0.37
CCS-206ENST00000530961 SPATA33Q96N06 139 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 MBOAT7Q96N66 472 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 C11orf49Q9H6J7 331 aa17.36■□□□□ 0.37
CCS-206ENST00000530961 AGO4Q9HCK5 861 aaKnown RBP17.36■□□□□ 0.37
CCS-206ENST00000530961 ATP9AO75110 1047 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 PPFIA4O75335 1185 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 PTGS1P23219 599 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 ACLYP53396 1101 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 BEX3Q00994 111 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 LETM2Q2VYF4 491 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 CYFIP1Q7L576 1253 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 NOSTRINQ8IVI9 506 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 SDF4Q9BRK5 362 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 TBC1D22BQ9NU19 505 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 POLR3EQ9NVU0 708 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 NFASCO94856 1347 aa17.35■□□□□ 0.37
CCS-206ENST00000530961 IPO5O00410 1097 aaKnown RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 NOP56O00567 594 aaKnown RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 ASGR1P07306 291 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 TRAPPC10P48553 1259 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 IRX5P78411 483 aaPredicted RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 DGKDQ16760 1214 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 DIS3LQ8TF46 1054 aaKnown RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 LENG9Q96B70 501 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 GLT1D1Q96MS3 346 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 GDF15Q99988 308 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 ZNF577Q9BSK1 485 aa17.34■□□□□ 0.37
CCS-206ENST00000530961 SENP6Q9GZR1 1112 aaPredicted RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
CCS-206ENST00000530961 SMCHD1A6NHR9 2005 aa17.33■□□□□ 0.37
CCS-206ENST00000530961 ELP1O95163 1332 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 CCNT1O60563 726 aaKnown RBP17.33■□□□□ 0.36
CCS-206ENST00000530961 TDP2O95551 362 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 MMP3P08254 477 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 HOXD8P13378 290 aaPredicted RBP17.33■□□□□ 0.36
CCS-206ENST00000530961 HSDL1Q3SXM5 330 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 MCTP1Q6DN14 999 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 RIT2Q99578 217 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 JPH1Q9HDC5 661 aaPredicted RBP17.33■□□□□ 0.36
CCS-206ENST00000530961 FOXD4L1Q9NU39 408 aa17.33■□□□□ 0.36
CCS-206ENST00000530961 A0A1W2PQ45 241 aaPredicted RBP17.32■□□□□ 0.36
CCS-206ENST00000530961 A0A1W2PQY0 241 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 FAM205CA6NFA0 338 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 MYL3P08590 195 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 SYT1P21579 422 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 CXCL17Q6UXB2 119 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 SEPT1Q8WYJ6 367 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 FAM20AQ96MK3 541 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 GPR20Q99678 358 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 MTG1Q9BT17 334 aaPredicted RBP17.32■□□□□ 0.36
CCS-206ENST00000530961 SEZ6LQ9BYH1 1024 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 BCAS3Q9H6U6 928 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 STARD7Q9NQZ5 370 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 PKD2L1Q9P0L9 805 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 SLC9A2Q9UBY0 812 aa17.32■□□□□ 0.36
CCS-206ENST00000530961 NOL7Q9UMY1 257 aaKnown RBP17.32■□□□□ 0.36
CCS-206ENST00000530961 KIF28PB7ZC32 967 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 TBX3O15119 743 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 MSH4O15457 936 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 DHX15O43143 795 aaKnown RBP17.31■□□□□ 0.36
CCS-206ENST00000530961 PURAQ00577 322 aaKnown RBP17.31■□□□□ 0.36
CCS-206ENST00000530961 ITGB3BPQ13352 177 aaPredicted RBP17.31■□□□□ 0.36
CCS-206ENST00000530961 ORC2Q13416 577 aaPredicted RBP17.31■□□□□ 0.36
CCS-206ENST00000530961 C1orf53Q5VUE5 145 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 TDHQ8IZJ6 230 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 SLC5A5Q92911 643 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 FERMT2Q96AC1 680 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 VTI1AQ96AJ9 217 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 TCEAL9Q9UHQ7 104 aa17.31■□□□□ 0.36
CCS-206ENST00000530961 SORBS3O60504 671 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms