RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 FAM86B1E9PN63 330 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 TLR3O15455 904 aaKnown RBP21.38■■□□□ 1.01
GMDS-208ENST00000530927 EDIL3O43854 480 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 JAK2O60674 1132 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 FAM86B2P0C5J1 330 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 FDPSP14324 419 aaKnown RBP21.38■■□□□ 1.01
GMDS-208ENST00000530927 CYP2C18P33260 490 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 BMP8BP34820 402 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 RBM25P49756 843 aaKnown RBP21.38■■□□□ 1.01
GMDS-208ENST00000530927 PSEN2P49810 448 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 NEDD9Q14511 834 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 HIC1Q14526 733 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 METTL7BQ6UX53 244 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 CCDC148Q8NFR7 591 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 GPR20Q99678 358 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 C16orf70Q9BSU1 422 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 GLT8D2Q9H1C3 349 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 KCNH7Q9NS40 1196 aa21.38■■□□□ 1.01
GMDS-208ENST00000530927 F2P00734 622 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 GNA11P29992 359 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 FOSBP53539 338 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 MFSD10Q14728 455 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 KIAA0753Q2KHM9 967 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 GDF6Q6KF10 455 aaPredicted RBP21.37■■□□□ 1.01
GMDS-208ENST00000530927 NSUN7Q8NE18 718 aaKnown RBP21.37■■□□□ 1.01
GMDS-208ENST00000530927 SH3GLB2Q9NR46 395 aa21.37■■□□□ 1.01
GMDS-208ENST00000530927 NOP56O00567 594 aaKnown RBP21.36■■□□□ 1.01
GMDS-208ENST00000530927 TIMP1P01033 207 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 LGALS2P05162 132 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 ITGB3BPQ13352 177 aaPredicted RBP21.36■■□□□ 1.01
GMDS-208ENST00000530927 CEP55Q53EZ4 464 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 C9orf50Q5SZB4 431 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 UTP14CQ5TAP6 766 aaKnown RBP21.36■■□□□ 1.01
GMDS-208ENST00000530927 NFRKBQ6P4R8 1299 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 CTAGE1Q96RT6 745 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 SENP7Q9BQF6 1050 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 ORC3Q9UBD5 711 aaPredicted RBP21.36■■□□□ 1.01
GMDS-208ENST00000530927 HDAC6Q9UBN7 1215 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 PCDHA4Q9UN74 947 aa21.36■■□□□ 1.01
GMDS-208ENST00000530927 STK36Q9NRP7 1315 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 HAS3O00219 553 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 SOX1O00570 391 aaPredicted RBP21.35■■□□□ 1.01
GMDS-208ENST00000530927 PPFIA4O75335 1185 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 CDKL5O76039 1030 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 ZNF76P36508 570 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 ZNF200P98182 395 aaPredicted RBP21.35■■□□□ 1.01
GMDS-208ENST00000530927 HIPK3Q9H422 1215 aa21.35■■□□□ 1.01
GMDS-208ENST00000530927 AGO4Q9HCK5 861 aaKnown RBP21.35■■□□□ 1.01
GMDS-208ENST00000530927 IGLV3-22A0A075B6J6 115 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 M0R2N6 131 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 MEIS1O00470 390 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 FXR1P51114 621 aaKnown RBP eCLIP21.34■■□□□ 1.01
GMDS-208ENST00000530927 CCL23P55773 120 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 CCDC83Q8IWF9 413 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 TDHQ8IZJ6 230 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 NOC4LQ9BVI4 516 aaKnown RBP21.34■■□□□ 1.01
GMDS-208ENST00000530927 WNT8AQ9H1J5 351 aa21.34■■□□□ 1.01
GMDS-208ENST00000530927 GSTTP1A0A1W2PQM5 241 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 DDX39AO00148 427 aaKnown RBP21.33■■□□□ 1.01
GMDS-208ENST00000530927 CSF2RAP15509 400 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 SHHQ15465 462 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 PLA2G4DQ86XP0 818 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 TEX2Q8IWB9 1127 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 BLIDQ8IZY5 108 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 BICD2Q8TD16 824 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 OXER1Q8TDS5 423 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 SCLYQ96I15 445 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 CDHR1Q96JP9 859 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 PHF20Q9BVI0 1012 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 LIMCH1Q9UPQ0 1083 aa21.33■■□□□ 1.01
GMDS-208ENST00000530927 CD2BP2O95400 341 aaKnown RBP21.32■■□□□ 1
GMDS-208ENST00000530927 CYP3A4P08684 503 aa21.32■■□□□ 1
GMDS-208ENST00000530927 ACRP10323 421 aa21.32■■□□□ 1
GMDS-208ENST00000530927 TCF7P36402 384 aaPredicted RBP21.32■■□□□ 1
GMDS-208ENST00000530927 FPGSQ05932 587 aa21.32■■□□□ 1
GMDS-208ENST00000530927 PTGISQ16647 500 aa21.32■■□□□ 1
GMDS-208ENST00000530927 MFSD5Q6N075 450 aa21.32■■□□□ 1
GMDS-208ENST00000530927 C7orf31Q8N865 590 aa21.32■■□□□ 1
GMDS-208ENST00000530927 H3BRB1 525 aa21.31■■□□□ 1
GMDS-208ENST00000530927 C16orf59Q7L2K0 433 aa21.31■■□□□ 1
GMDS-208ENST00000530927 DAGLBQ8NCG7 672 aa21.31■■□□□ 1
GMDS-208ENST00000530927 TBCKQ8TEA7 893 aa21.31■■□□□ 1
GMDS-208ENST00000530927 DHX38Q92620 1227 aaKnown RBP21.31■■□□□ 1
GMDS-208ENST00000530927 WNT8BQ93098 351 aa21.31■■□□□ 1
GMDS-208ENST00000530927 GJA10Q969M2 543 aa21.31■■□□□ 1
GMDS-208ENST00000530927 LENG9Q96B70 501 aa21.31■■□□□ 1
GMDS-208ENST00000530927 LRCH3Q96II8 777 aa21.31■■□□□ 1
GMDS-208ENST00000530927 KATNAL1Q9BW62 490 aa21.31■■□□□ 1
GMDS-208ENST00000530927 TUT1Q9H6E5 874 aaKnown RBP21.31■■□□□ 1
GMDS-208ENST00000530927 JPH1Q9HDC5 661 aaPredicted RBP21.31■■□□□ 1
GMDS-208ENST00000530927 GTF2IRD1Q9UHL9 959 aa21.31■■□□□ 1
GMDS-208ENST00000530927 PTPN11Q06124 597 aaPredicted RBP21.3■■□□□ 1
GMDS-208ENST00000530927 PRR16Q569H4 304 aa21.3■■□□□ 1
GMDS-208ENST00000530927 EARS2Q5JPH6 523 aaKnown RBP21.3■■□□□ 1
GMDS-208ENST00000530927 SESTD1Q86VW0 696 aa21.3■■□□□ 1
GMDS-208ENST00000530927 GIMAP8Q8ND71 665 aaPredicted RBP21.3■■□□□ 1
GMDS-208ENST00000530927 PCYT2Q99447 389 aa21.3■■□□□ 1
GMDS-208ENST00000530927 SEZ6LQ9BYH1 1024 aa21.3■■□□□ 1
GMDS-208ENST00000530927 FAM205CA6NFA0 338 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms