RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 FAM50BQ9Y247 325 aa13.19□□□□□ -0.3
SF3B2-208ENST00000529994 MRPL11Q9Y3B7 192 aaKnown RBP13.19□□□□□ -0.3
SF3B2-208ENST00000529994 C19orf67A6NJJ6 358 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 PPFIA4O75335 1185 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 SMIM10L2AP0DMW4 78 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 SMIM10L2BP0DMW5 78 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 HOXD8P13378 290 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-208ENST00000529994 HOXA13P31271 388 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-208ENST00000529994 CTNNB1P35222 781 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 LTBRP36941 435 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 DLX2Q07687 328 aaPredicted RBP13.18□□□□□ -0.3
SF3B2-208ENST00000529994 IL31RAQ8NI17 732 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 ESR2Q92731 530 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 BCAS3Q9H6U6 928 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 PRKAG3Q9UGI9 489 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 TECTAO75443 2155 aa13.18□□□□□ -0.3
SF3B2-208ENST00000529994 KAT6AQ92794 2004 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 H3BRB1 525 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 OPLAHO14841 1288 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 GRM6O15303 877 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 KDM4AO75164 1064 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 UBA1P22314 1058 aaKnown RBP13.17□□□□□ -0.3
SF3B2-208ENST00000529994 GTF2F1P35269 517 aaKnown RBP eCLIP13.17□□□□□ -0.3
SF3B2-208ENST00000529994 COL19A1Q14993 1142 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 DGKHQ86XP1 1220 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 PDCD2LQ9BRP1 358 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 UPF3BQ9BZI7 483 aaKnown RBP13.17□□□□□ -0.3
SF3B2-208ENST00000529994 MAF1Q9H063 256 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 RNPEPQ9H4A4 650 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 IGFLR1Q9H665 355 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 TUT1Q9H6E5 874 aaKnown RBP13.17□□□□□ -0.3
SF3B2-208ENST00000529994 JMJD4Q9H9V9 463 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 MLXIPQ9HAP2 919 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 DIAPH3Q9NSV4 1193 aa13.17□□□□□ -0.3
SF3B2-208ENST00000529994 ZMYM6O95789 1325 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 CCDC171Q6TFL3 1326 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 BAZ2BQ9UIF8 2168 aaKnown RBP13.16□□□□□ -0.3
SF3B2-208ENST00000529994 PARP1P09874 1014 aaKnown RBP13.16□□□□□ -0.3
SF3B2-208ENST00000529994 SDSP20132 328 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 HSD17B4P51659 736 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 HYAL1Q12794 435 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
SF3B2-208ENST00000529994 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 MFSD14AQ96MC6 490 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 RNF41Q9H4P4 317 aaPredicted RBP13.16□□□□□ -0.3
SF3B2-208ENST00000529994 SETD4Q9NVD3 440 aa13.16□□□□□ -0.3
SF3B2-208ENST00000529994 B4E1Z4 1266 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 LINC01565O15544 149 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 MBTPS2O43462 519 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 PPP1R11O60927 126 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-208ENST00000529994 LGALS2P05162 132 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 PCP11498 1178 aaKnown RBP13.15□□□□□ -0.3
SF3B2-208ENST00000529994 PDE4AP27815 886 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 PGM5Q15124 567 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 KCNV1Q6PIU1 500 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 CWC27Q6UX04 472 aaKnown RBP13.15□□□□□ -0.3
SF3B2-208ENST00000529994 VSIG10LQ86VR7 867 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 FCHSD1Q86WN1 690 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 IQCA1Q86XH1 822 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 RNF135Q8IUD6 432 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 STAG2Q8N3U4 1231 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 ZSCAN10Q96SZ4 725 aaPredicted RBP13.15□□□□□ -0.3
SF3B2-208ENST00000529994 AMNQ9BXJ7 453 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 LAMA4Q16363 1823 aa13.15□□□□□ -0.3
SF3B2-208ENST00000529994 ZNF213O14771 459 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 TBX10O75333 385 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 HOXC8P31273 242 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 BMPR1AP36894 532 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 CTC1Q2NKJ3 1217 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 HERC4Q5GLZ8 1057 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-208ENST00000529994 IER5LQ5T953 404 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 STOX1Q6ZVD7 989 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 TRIM50Q86XT4 487 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 ENAHQ8N8S7 591 aaPredicted RBP13.14□□□□□ -0.31
SF3B2-208ENST00000529994 SNX27Q96L92 541 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 OSBPL3Q9H4L5 887 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 TELO2Q9Y4R8 837 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 PCDHA1Q9Y5I3 950 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 COL4A6Q14031 1691 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 USP34Q70CQ2 3546 aa13.14□□□□□ -0.31
SF3B2-208ENST00000529994 C5orf67F2Z3F1 127 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 STXBP3O00186 592 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 NOP56O00567 594 aaKnown RBP13.13□□□□□ -0.31
SF3B2-208ENST00000529994 NCK2O43639 380 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 LINC00271P0C7V0 271 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 CCND2P30279 289 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 ARHGAP4P98171 946 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 SP4Q02446 784 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 PRSS33Q8NF86 280 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
SF3B2-208ENST00000529994 C11orf84Q9BUA3 381 aaPredicted RBP13.13□□□□□ -0.31
SF3B2-208ENST00000529994 ALG13Q9NP73 1137 aaKnown RBP13.13□□□□□ -0.31
SF3B2-208ENST00000529994 ZDBF2Q9HCK1 2354 aa13.13□□□□□ -0.31
SF3B2-208ENST00000529994 KIAA1671Q9BY89 1806 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 KLRF2D3W0D1 207 aa13.12□□□□□ -0.31
SF3B2-208ENST00000529994 CAND2O75155 1236 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms