RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 CUL4AQ13619 759 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PDE1CQ14123 709 aaPredicted RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 C7orf31Q8N865 590 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 RABGGTAQ92696 567 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 NACC1Q96RE7 527 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 AP1M1Q9BXS5 423 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SNX25Q9H3E2 840 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 CACYBPQ9HB71 228 aaKnown RBP8.82□□□□□ -1
CTNND1-220ENST00000529526 TTC37Q6PGP7 1564 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 NEDD4P46934 1319 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 WDR17Q8IZU2 1322 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 PRR36Q9H6K5 1346 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 NEO1Q92859 1461 aa8.82□□□□□ -1
CTNND1-220ENST00000529526 OSBPP22059 807 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 USP14P54578 494 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 MRPS25P82663 173 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 HLFQ16534 295 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 MMEL1Q495T6 779 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 MAP7D3Q8IWC1 876 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 CFAP36Q96G28 342 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 SLC38A10Q9HBR0 1119 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 MED4Q9NPJ6 270 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 INTS9Q9NV88 658 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 RCOR1Q9UKL0 485 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 DAAM1Q9Y4D1 1078 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 VGLL3A8MV65 326 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 CACNB3P54284 484 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 CDKL2Q92772 493 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 FIS1Q9Y3D6 152 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 NPHP4O75161 1426 aaPredicted RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 KIF3CO14782 793 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ZNF853P0CG23 659 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 RETREG2Q8NC44 543 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 DDX27Q96GQ7 796 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 WDR11Q9BZH6 1224 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 THAP9Q9H5L6 903 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ANAPC5Q9UJX4 755 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ARAP3Q8WWN8 1544 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ECEL1O95672 775 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ATXN8OSP0DMR3 200 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 ATP1A3P13637 1013 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 CYP27A1Q02318 531 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 TCP11X2Q5H9J9 407 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 CC2D2BQ6DHV5 1058 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 DARS2Q6PI48 645 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 VSTM4Q8IW00 320 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 KCTD6Q8NC69 237 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 GBP5Q96PP8 586 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 STK17AQ9UEE5 414 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 FAN1Q9Y2M0 1017 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 KIF1BO60333 1816 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 FRMD3A2A2Y4 597 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 GCFC2P16383 781 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 CASP1P29466 404 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 RFC1P35251 1148 aaPredicted RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 FKBP3Q00688 224 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 IFT88Q13099 833 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 NKX1-1Q15270 411 aaPredicted RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 NOP9Q86U38 636 aaKnown RBP8.81□□□□□ -1
CTNND1-220ENST00000529526 GDAP1Q8TB36 358 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 RUNDC3BQ96NL0 473 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 KIF9Q9HAQ2 790 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 PHLPP2Q6ZVD8 1323 aa8.81□□□□□ -1
CTNND1-220ENST00000529526 PGRMC1O00264 195 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 CPP00450 1065 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 IFNAR1P17181 557 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 EIF2AK2P19525 551 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 IL1RL1Q01638 556 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 NECTIN1Q15223 517 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 RYBPQ8N488 228 aaPredicted RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 SLC17A8Q8NDX2 589 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 TMEM206Q9H813 350 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 ATG3Q9NT62 314 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 BCAP29Q9UHQ4 241 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 TRPC5Q9UL62 973 aaPredicted RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 FNDC3AQ9Y2H6 1198 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 HIP1RO75146 1068 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 SRGAP2CP0DJJ0 459 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 KRT3P12035 628 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 EPHB4P54760 987 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 IL9RQ01113 521 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 TBC1D10CQ8IV04 446 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 CALN1Q9BXU9 219 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 CPVLQ9H3G5 476 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 PARVGQ9HBI0 331 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 DNAJC17Q9NVM6 304 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 ERBB3P21860 1342 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 WDR46O15213 610 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 BBOX1O75936 387 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 ARID5BQ14865 1188 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 DNAJC24Q6P3W2 148 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 RSRC2Q7L4I2 434 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 MICAL1Q8TDZ2 1067 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 PRPF31Q8WWY3 499 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 IPO11Q9UI26 975 aaKnown RBP8.8□□□□□ -1
CTNND1-220ENST00000529526 PNMA2Q9UL42 364 aa8.8□□□□□ -1
CTNND1-220ENST00000529526 TSPOAP1O95153 1857 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms