RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 SYNGAP1Q96PV0 1343 aa13.28□□□□□ -0.28
TM9SF1-207ENST00000528895 PLXNA1Q9UIW2 1896 aa13.27□□□□□ -0.28
TM9SF1-207ENST00000528895 POTEMA6NI47 508 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 COBLO75128 1261 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 TBC1D8O95759 1140 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 ARP10275 920 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 LIG1P18858 919 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 ICAM3P32942 547 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 NDUFA8P51970 172 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 SOX10P56693 466 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 SP3Q02447 781 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 PPP2R5CQ13362 524 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 ARHGEF6Q15052 776 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 SPECC1Q5M775 1068 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 CCDC183Q5T5S1 534 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 NCAPH2Q6IBW4 605 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 CAVIN1Q6NZI2 390 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 CABP7Q86V35 215 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 GIMAP8Q8ND71 665 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 SNX29Q8TEQ0 813 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 MAML3Q96JK9 1138 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 ZFP91Q96JP5 570 aaPredicted RBP13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 CCSER1Q9C0I3 900 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 NUP62CLQ9H1M0 184 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 VTA1Q9NP79 307 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 DACT1Q9NYF0 836 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 PCDH10Q9P2E7 1040 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 USP25Q9UHP3 1055 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 HOOK1Q9UJC3 728 aaKnown RBP13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 VAV3Q9UKW4 847 aa13.27□□□□□ -0.29
TM9SF1-207ENST00000528895 NR1I2O75469 434 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 PSMD10O75832 226 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 NFASCO94856 1347 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 HOXC6P09630 235 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 PSMC4P43686 418 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 KRT76Q01546 638 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 MAMDC4Q6UXC1 1216 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 SEPT14Q6ZU15 432 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 CEP57L1Q8IYX8 460 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 FMR1NBQ8N0W7 255 aaPredicted RBP13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 IQUBQ8NA54 791 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 NEK9Q8TD19 979 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 EPSTI1Q96J88 318 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 TIGD1Q96MW7 591 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 NT5C3AQ9H0P0 336 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 DISC1Q9NRI5 854 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 PKD2L1Q9P0L9 805 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 HTTP42858 3142 aa13.26□□□□□ -0.29
TM9SF1-207ENST00000528895 MGAMO43451 1857 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 SPATA31C2B4DYI2 1134 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 DDX39AO00148 427 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 CTAGE5O15320 804 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 CHMP2AO43633 222 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 ECM2O94769 699 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 ZNF202O95125 648 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 TGFB3P10600 412 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 HOXD10P28358 340 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 SFNP31947 248 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 STAT6P42226 847 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 JAK3P52333 1124 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 IRF5Q13568 498 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 NEDD9Q14511 834 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 TTLL4Q14679 1199 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 OLFML2BQ68BL8 750 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 KANK3Q6NY19 840 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 OTOP1Q7RTM1 612 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 CTU1Q7Z7A3 348 aaKnown RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 FBXO16Q8IX29 292 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 ENGASEQ8NFI3 743 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 SCFD2Q8WU76 684 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 DHX58Q96C10 678 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 ERO1AQ96HE7 468 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 UIMC1Q96RL1 719 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 MAGEF1Q9HAY2 307 aa13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 JPH1Q9HDC5 661 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.25□□□□□ -0.29
TM9SF1-207ENST00000528895 MKI67P46013 3256 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 PP2D1A8MPX8 630 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 POLR2DO15514 142 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 RGS20O76081 388 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 LETM1O95202 739 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 GNRH1P01148 92 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 KCNA2P16389 499 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 CCT6AP40227 531 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 SPIRE1Q08AE8 756 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 ITGB3BPQ13352 177 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 SNW1Q13573 536 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 KARSQ15046 597 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 RRAGBQ5VZM2 374 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 ZNF746Q6NUN9 644 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 USP49Q70CQ1 688 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 EEPD1Q7L9B9 569 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 MIER3Q7Z3K6 550 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 SMAP1Q8IYB5 467 aaPredicted RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 TRMT44Q8IYL2 757 aaKnown RBP13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 PDILTQ8N807 584 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 CNNM3Q8NE01 707 aa13.24□□□□□ -0.29
TM9SF1-207ENST00000528895 RDM1Q8NG50 284 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms