RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 GPR20Q99678 358 aa37.84■■■■□ 3.65
SSSCA1-205ENST00000527920 HSFX4A0A1B0GTS1 333 aaPredicted RBP37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 HSFX3A0A1B0GWH4 333 aaPredicted RBP37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 CLK2P49760 499 aaKnown RBP37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 RBL2Q08999 1139 aa37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 RETREG2Q8NC44 543 aa37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 CCDC12Q8WUD4 166 aaPredicted RBP37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 ALG1Q9BT22 464 aa37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 RNF26Q9BY78 433 aaPredicted RBP37.83■■■■□ 3.65
SSSCA1-205ENST00000527920 FGBP02675 491 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 LGALS2P05162 132 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 IFNAR1P17181 557 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 MTMR1Q13613 665 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 SCLYQ96I15 445 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 JADE2Q9NQC1 790 aa37.82■■■■□ 3.64
SSSCA1-205ENST00000527920 TMEM265A0A087WTH1 108 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 EIF5BO60841 1220 aaKnown RBP37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 KCNA2P16389 499 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 PKN1Q16512 942 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 AFAP1L1Q8TED9 768 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 VWCEQ96DN2 955 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 ANO3Q9BYT9 981 aa37.81■■■■□ 3.64
SSSCA1-205ENST00000527920 H3BRB1 525 aa37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 AKAP17AQ02040 695 aaKnown RBP37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 ZNF697Q5TEC3 545 aa37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 MCTP2Q6DN12 878 aa37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 ZNF274Q96GC6 653 aaPredicted RBP37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 UPF3BQ9BZI7 483 aaKnown RBP37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 ZMYND12Q9H0C1 365 aa37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 TUT1Q9H6E5 874 aaKnown RBP37.8■■■■□ 3.64
SSSCA1-205ENST00000527920 IQCF3P0C7M6 154 aa37.79■■■■□ 3.64
SSSCA1-205ENST00000527920 SREBF1P36956 1147 aa37.79■■■■□ 3.64
SSSCA1-205ENST00000527920 ANAPC15P60006 121 aa37.79■■■■□ 3.64
SSSCA1-205ENST00000527920 HOXC8P31273 242 aa37.78■■■■□ 3.64
SSSCA1-205ENST00000527920 PTK7Q13308 1070 aa37.78■■■■□ 3.64
SSSCA1-205ENST00000527920 MXRA8Q9BRK3 442 aa37.78■■■■□ 3.64
SSSCA1-205ENST00000527920 ATP9AO75110 1047 aa37.77■■■■□ 3.64
SSSCA1-205ENST00000527920 DHX38Q92620 1227 aaKnown RBP37.77■■■■□ 3.64
SSSCA1-205ENST00000527920 PHKBQ93100 1093 aa37.77■■■■□ 3.64
SSSCA1-205ENST00000527920 C6orf50Q9HD87 102 aa37.77■■■■□ 3.64
SSSCA1-205ENST00000527920 PARNO95453 639 aaKnown RBP37.76■■■■□ 3.64
SSSCA1-205ENST00000527920 NCOA5Q9HCD5 579 aaKnown RBP37.76■■■■□ 3.64
SSSCA1-205ENST00000527920 PDRG1Q9NUG6 133 aa37.76■■■■□ 3.64
SSSCA1-205ENST00000527920 ZNF215Q9UL58 517 aaPredicted RBP37.76■■■■□ 3.64
SSSCA1-205ENST00000527920 GNA11P29992 359 aa37.75■■■■□ 3.63
SSSCA1-205ENST00000527920 CCT2P78371 535 aaKnown RBP37.75■■■■□ 3.63
SSSCA1-205ENST00000527920 CEP55Q53EZ4 464 aa37.75■■■■□ 3.63
SSSCA1-205ENST00000527920 CXXC1Q9P0U4 656 aaPredicted RBP37.75■■■■□ 3.63
SSSCA1-205ENST00000527920 TANC1Q9C0D5 1861 aa37.75■■■■□ 3.63
SSSCA1-205ENST00000527920 SELPP16109 830 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 OTOP2Q7RTS6 562 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 CCDC148Q8NFR7 591 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 IL17RAQ96F46 866 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 PGBD1Q96JS3 809 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 SLC26A6Q9BXS9 759 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 KCNH7Q9NS40 1196 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 TMEM260Q9NX78 707 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 STXBP5LQ9Y2K9 1186 aa37.74■■■■□ 3.63
SSSCA1-205ENST00000527920 NIPA1Q7RTP0 329 aa37.73■■■■□ 3.63
SSSCA1-205ENST00000527920 REXO1Q8N1G1 1221 aaKnown RBP37.73■■■■□ 3.63
SSSCA1-205ENST00000527920 SMIM10L2AP0DMW4 78 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 SMIM10L2BP0DMW5 78 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 DNAJB2P25686 324 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 ARHGAP4P98171 946 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 TRIM71Q2Q1W2 868 aaKnown RBP37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 LRRC8DQ7L1W4 858 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 SERINC5Q86VE9 423 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 TRIM22Q8IYM9 498 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 BICD2Q8TD16 824 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 CRYGNQ8WXF5 182 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 SEPT1Q8WYJ6 367 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 SEMA6BQ9H3T3 888 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 SH3GLB2Q9NR46 395 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 TELO2Q9Y4R8 837 aa37.72■■■■□ 3.63
SSSCA1-205ENST00000527920 NFASCO94856 1347 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 C17orf102A2RUQ5 167 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 MEIS1O00470 390 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 CKBP12277 381 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 TCF7P36402 384 aaPredicted RBP37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 SP4Q02446 784 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 HIC1Q14526 733 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 DEFB128Q7Z7B8 93 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 TRIM50Q86XT4 487 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 GUCD1Q96NT3 240 aa37.71■■■■□ 3.63
SSSCA1-205ENST00000527920 CYP3A4P08684 503 aa37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 ACTN1P12814 892 aa37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 JAKMIP3Q5VZ66 844 aa37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 CYP2W1Q8TAV3 490 aa37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 TTYH1Q9H313 450 aaPredicted RBP37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 JPH1Q9HDC5 661 aaPredicted RBP37.7■■■■□ 3.63
SSSCA1-205ENST00000527920 CPLX1O14810 134 aa37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 GNAT1P11488 350 aa37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 ZNF200P98182 395 aaPredicted RBP37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 CPLX2Q6PUV4 134 aaKnown RBP37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 SLC4A7Q9Y6M7 1214 aa37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 DOCK5Q9H7D0 1870 aa37.69■■■■□ 3.62
SSSCA1-205ENST00000527920 GSTTP1A0A1W2PQM5 241 aa37.68■■■■□ 3.62
SSSCA1-205ENST00000527920 UTP14CQ5TAP6 766 aaKnown RBP37.68■■■■□ 3.62
SSSCA1-205ENST00000527920 FAM177A1Q8N128 213 aaPredicted RBP37.68■■■■□ 3.62
SSSCA1-205ENST00000527920 ATP6V0A1Q93050 837 aa37.68■■■■□ 3.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms