RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 PCDHB15Q9Y5E8 787 aa14.34□□□□□ -0.11
SRPRA-202ENST00000527817 TECTAO75443 2155 aa14.33□□□□□ -0.11
SRPRA-202ENST00000527817 TREHO43280 583 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 MBTPS2O43462 519 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 BMPR1AP36894 532 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 FAM26DQ5JW98 314 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 BMP8AQ7Z5Y6 402 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 IQCA1Q86XH1 822 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 TBC1D10CQ8IV04 446 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 FIBCD1Q8N539 461 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 IL17RAQ96F46 866 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 IFIH1Q9BYX4 1025 aaKnown RBP14.33□□□□□ -0.12
SRPRA-202ENST00000527817 OSBPL7Q9BZF2 842 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 KAT14Q9H8E8 782 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 VAT1LQ9HCJ6 419 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 RWDD3Q9Y3V2 267 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 COL4A6Q14031 1691 aa14.33□□□□□ -0.12
SRPRA-202ENST00000527817 OPLAHO14841 1288 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 SMIM10L2AP0DMW4 78 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 SMIM10L2BP0DMW5 78 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 GNAT1P11488 350 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 MYCLP12524 364 aaPredicted RBP14.32□□□□□ -0.12
SRPRA-202ENST00000527817 HYAL1Q12794 435 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 ZNF589Q86UQ0 364 aaPredicted RBP14.32□□□□□ -0.12
SRPRA-202ENST00000527817 RNF135Q8IUD6 432 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 EDAQ92838 391 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 SNX27Q96L92 541 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 C11orf84Q9BUA3 381 aaPredicted RBP14.32□□□□□ -0.12
SRPRA-202ENST00000527817 AMNQ9BXJ7 453 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 USP26Q9BXU7 913 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 MLXIPQ9HAP2 919 aa14.32□□□□□ -0.12
SRPRA-202ENST00000527817 USP34Q70CQ2 3546 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 ZNF213O14771 459 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 GRM6O15303 877 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 PARP1P09874 1014 aaKnown RBP14.31□□□□□ -0.12
SRPRA-202ENST00000527817 LINC00271P0C7V0 271 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 PDE1AP54750 535 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 DLX2Q07687 328 aaPredicted RBP14.31□□□□□ -0.12
SRPRA-202ENST00000527817 NMIQ13287 307 aaPredicted RBP14.31□□□□□ -0.12
SRPRA-202ENST00000527817 PGM5Q15124 567 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 PKN1Q16512 942 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 CLP1Q92989 425 aaKnown RBP14.31□□□□□ -0.12
SRPRA-202ENST00000527817 MUTYHQ9UIF7 546 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 NLRC5Q86WI3 1866 aa14.31□□□□□ -0.12
SRPRA-202ENST00000527817 DHX16O60231 1041 aaKnown RBP14.3□□□□□ -0.12
SRPRA-202ENST00000527817 SORBS3O60504 671 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 KDM4AO75164 1064 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 LGALS2P05162 132 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 UBA1P22314 1058 aaKnown RBP14.3□□□□□ -0.12
SRPRA-202ENST00000527817 CTNNB1P35222 781 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 ADAM17P78536 824 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 ADAM15Q13444 863 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 SMAD4Q13485 552 aaKnown RBP14.3□□□□□ -0.12
SRPRA-202ENST00000527817 ANKRD45Q5TZF3 282 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 MTMR8Q96EF0 704 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 ZSCAN10Q96SZ4 725 aaPredicted RBP14.3□□□□□ -0.12
SRPRA-202ENST00000527817 PRRX2Q99811 253 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 ZBTB47Q9UFB7 747 aaPredicted RBP14.3□□□□□ -0.12
SRPRA-202ENST00000527817 MYH6P13533 1939 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 NEDD4P46934 1319 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 CCDC171Q6TFL3 1326 aa14.3□□□□□ -0.12
SRPRA-202ENST00000527817 RALGAPA2Q2PPJ7 1873 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 ZDBF2Q9HCK1 2354 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 STXBP3O00186 592 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 EYA4O95677 639 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 CTSHP09668 335 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 CCND2P30279 289 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
SRPRA-202ENST00000527817 ENAHQ8N8S7 591 aaPredicted RBP14.29□□□□□ -0.12
SRPRA-202ENST00000527817 GPKOWQ92917 476 aaPredicted RBP eCLIP14.29□□□□□ -0.12
SRPRA-202ENST00000527817 ZNF689Q96CS4 500 aaPredicted RBP14.29□□□□□ -0.12
SRPRA-202ENST00000527817 PLVAPQ9BX97 442 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 BCAS3Q9H6U6 928 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 SETD4Q9NVD3 440 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 ZSWIM5Q9P217 1185 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 CD207Q9UJ71 328 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 PCDHA1Q9Y5I3 950 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 CACNA1HO95180 2353 aa14.29□□□□□ -0.12
SRPRA-202ENST00000527817 ENPP3O14638 875 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 ZBTB5O15062 677 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 ICAM3P32942 547 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 PTPN5P54829 565 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 TRAF1Q13077 416 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 NEDD9Q14511 834 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 CLUL1Q15846 466 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 TRIM67Q6ZTA4 783 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 PRSS33Q8NF86 280 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 IL31RAQ8NI17 732 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 MSLNLQ96KJ4 702 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 PHOX2BQ99453 314 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 IGFLR1Q9H665 355 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 EHMT1Q9H9B1 1298 aa14.28□□□□□ -0.12
SRPRA-202ENST00000527817 RC3H2Q9HBD1 1191 aaKnown RBP14.28□□□□□ -0.12
SRPRA-202ENST00000527817 TTC3P53804 2025 aa14.27□□□□□ -0.12
SRPRA-202ENST00000527817 KAT6AQ92794 2004 aa14.27□□□□□ -0.12
SRPRA-202ENST00000527817 TRIM6-TRIM34B2RNG4 842 aa14.27□□□□□ -0.13
SRPRA-202ENST00000527817 KLRF2D3W0D1 207 aa14.27□□□□□ -0.13
SRPRA-202ENST00000527817 GCOM1H8Y6P7 765 aaPredicted RBP14.27□□□□□ -0.13
SRPRA-202ENST00000527817 NOP56O00567 594 aaKnown RBP14.27□□□□□ -0.13
SRPRA-202ENST00000527817 ST18O60284 1047 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms