RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CMTR1Q8N1G2 835 aaKnown RBP25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 TMEM87BQ96K49 555 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 INPP4AQ96PE3 977 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 MTA3Q9BTC8 594 aa25.79■■□□□ 1.72
TRAPPC4-208ENST00000527680 LGR5O75473 907 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 SMIM10L2AP0DMW4 78 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 SMIM10L2BP0DMW5 78 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 SP4Q02446 784 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 UTP14CQ5TAP6 766 aaKnown RBP25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 KRT40Q6A162 431 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 METTL7BQ6UX53 244 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 NLRX1Q86UT6 975 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 SERINC5Q86VE9 423 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 ADAMTS19Q8TE59 1207 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 RNPEPQ9H4A4 650 aa25.78■■□□□ 1.72
TRAPPC4-208ENST00000527680 TTC28Q96AY4 2481 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 LCHNA4D1U4 455 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 SLC27A2O14975 620 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 PLEKHA8P1O95397 391 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 CALM1P0DP23 149 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 CALM2P0DP24 149 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 CALM3P0DP25 149 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 GNAT1P11488 350 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 RXRAP19793 462 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 POU3F3P20264 500 aaPredicted RBP25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 TCTN1Q2MV58 587 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 PCNX4Q63HM2 1172 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 CCDC82Q8N4S0 544 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 SRBD1Q8N5C6 995 aaKnown RBP25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 RAD9AQ99638 391 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 LSG1Q9H089 658 aaKnown RBP25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 PSTPIP2Q9H939 334 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 SLC12A7Q9Y666 1083 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 EMSYQ7Z589 1322 aa25.77■■□□□ 1.72
TRAPPC4-208ENST00000527680 SH2B2O14492 632 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 TREHO43280 583 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 MBTPS1Q14703 1052 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 AAK1Q2M2I8 961 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 XRRA1Q6P2D8 792 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 TRAF7Q6Q0C0 670 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 RAB11FIP4Q86YS3 637 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 GPR20Q99678 358 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 ESYT1Q9BSJ8 1104 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 ANO2Q9NQ90 1003 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 ZNF215Q9UL58 517 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 FRMPD4Q14CM0 1322 aa25.76■■□□□ 1.71
TRAPPC4-208ENST00000527680 PIK3CDO00329 1044 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 MEIS2O14770 477 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 GJB5O95377 273 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 TFF2Q03403 129 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 SEMA3FQ13275 785 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 GRB10Q13322 594 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 CREB3L3Q68CJ9 461 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 DBF4BQ8NFT6 615 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 UHRF1Q96T88 793 aaPredicted RBP25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 LRRC2Q9BYS8 371 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 SETD4Q9NVD3 440 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 MTUS1Q9ULD2 1270 aa25.75■■□□□ 1.71
TRAPPC4-208ENST00000527680 RBAK-RBAKDNI3L0D1 243 aa25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 LIFRP42702 1097 aa25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 SYNE3Q6ZMZ3 975 aa25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 SPRED2Q7Z698 418 aa25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 GIMAP8Q8ND71 665 aaPredicted RBP25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 DOCK5Q9H7D0 1870 aa25.74■■□□□ 1.71
TRAPPC4-208ENST00000527680 TCF20Q9UGU0 1960 aaKnown RBP25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 PTPRSQ13332 1948 aa25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 hCG_1642624A0A1W2PR95 340 aa25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 AMHP03971 560 aa25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 MYOCDQ8IZQ8 938 aa25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 SENP7Q9BQF6 1050 aa25.73■■□□□ 1.71
TRAPPC4-208ENST00000527680 KAT6AQ92794 2004 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 CTSHP09668 335 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 NECTIN1Q15223 517 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 TRIM50Q86XT4 487 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 FANCBQ8NB91 859 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 TGS1Q96RS0 853 aaKnown RBP25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 INSL6Q9Y581 213 aa25.72■■□□□ 1.71
TRAPPC4-208ENST00000527680 SPDYE3A6NKU9 549 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 ARHGAP4P98171 946 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 RNF20Q5VTR2 975 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 SEPT8Q92599 483 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 CDHR1Q96JP9 859 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 COG5Q9UP83 839 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 TELO2Q9Y4R8 837 aa25.71■■□□□ 1.71
TRAPPC4-208ENST00000527680 SPTBN5Q9NRC6 3674 aaKnown RBP25.7■■□□□ 1.71
TRAPPC4-208ENST00000527680 COL9A3Q14050 684 aaPredicted RBP25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 UBE2SQ16763 222 aa25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 PLEKHG4Q58EX7 1191 aa25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 HEATR3Q7Z4Q2 680 aa25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 MICU3Q86XE3 530 aa25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 GDPD5Q8WTR4 605 aa25.7■■□□□ 1.7
TRAPPC4-208ENST00000527680 LINC01553A4QN01 128 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 CAND2O75155 1236 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 BMP1P13497 986 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 HOXC8P31273 242 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 KCNQ1P51787 676 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 HLA-CQ95604 372 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 GPRASP2Q96D09 838 aa25.69■■□□□ 1.7
TRAPPC4-208ENST00000527680 SUGCTQ9HAC7 445 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms